RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-215	ENST00000621534	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.84	□□□□□ -0.35
PSMD13-215	ENST00000621534	LILRB1	Q8NHL6	650 aa	Predicted RBP	12.84	□□□□□ -0.35
PSMD13-215	ENST00000621534	S100A13	Q99584	98 aa		12.84	□□□□□ -0.35
PSMD13-215	ENST00000621534	TMEM204	Q9BSN7	226 aa		12.84	□□□□□ -0.35
PSMD13-215	ENST00000621534	SLC22A4	Q9H015	551 aa		12.84	□□□□□ -0.35
PSMD13-215	ENST00000621534	CST11	Q9H112	138 aa		12.84	□□□□□ -0.35
PSMD13-215	ENST00000621534	CXXC4	Q9H2H0	198 aa		12.84	□□□□□ -0.35
PSMD13-215	ENST00000621534	MRPS7	Q9Y2R9	242 aa	Known RBP	12.84	□□□□□ -0.35
PSMD13-215	ENST00000621534	LRP5L	A4QPB2	252 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	C3orf80	F5H4A9	247 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534		F8VVB4	439 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534		F8VWA3	439 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534		J3QT63	122 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	XRCC3	O43542	346 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	RHBDL1	O75783	438 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	HLA-DQB1	P01920	261 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	IGFBP2	P18065	325 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	BCL3	P20749	454 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	MPZ	P25189	248 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	NR4A2	P43354	598 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	RPS27A	P62979	156 aa	Known RBP	12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	MAB21L1	Q13394	359 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	C16orf87	Q6PH81	154 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	BAIAP2L2	Q6UXY1	529 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	SCCPDH	Q8NBX0	429 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	OR2Z1	Q8NG97	314 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	C14orf79	Q96F83	325 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	ZNF488	Q96MN9	340 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	SPOCK3	Q9BQ16	436 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	PKIB	Q9C010	78 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	PLK3	Q9H4B4	646 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	ABCB10	Q9NRK6	738 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	IL36G	Q9NZH8	169 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	MTCH1	Q9NZJ7	389 aa		12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.83	□□□□□ -0.36
PSMD13-215	ENST00000621534	CHD3	Q12873	2000 aa	Known RBP	12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	TMEM210	A6NLX4	147 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	RAB27B	O00194	218 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	UPK1B	O75841	260 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	GRP	P07492	148 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	CSF3	P09919	207 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	MNDA	P41218	407 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	RANBP1	P43487	201 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	VEGFC	P49767	419 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	SELENOV	P59797	346 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	DGCR2	P98153	550 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	NKPD1	Q17RQ9	610 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	SPRN	Q5BIV9	151 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	RNASE12	Q5GAN4	147 aa	Known RBP	12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	PRAMEF6	Q5VXH4	476 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	PYHIN1	Q6K0P9	492 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	CDH24	Q86UP0	819 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	SAXO1	Q8IYX7	474 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	OR8H2	Q8N162	312 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534		Q8N402	240 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	GDPD1	Q8N9F7	314 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	AQP3	Q92482	292 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	CCDC32	Q9BV29	185 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	SELENOI	Q9C0D9	397 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	DIABLO	Q9NR28	239 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	RBFOX1	Q9NWB1	397 aa	Known RBP	12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	MED13L	Q71F56	2210 aa		12.82	□□□□□ -0.36
PSMD13-215	ENST00000621534	TRAV18	A0A075B6X5	111 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	PLSCR5	A0PG75	271 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	SPRY3	O43610	288 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	RBMX	P38159	391 aa	Known RBP	12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	TLE4	Q04727	773 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	IL24	Q13007	206 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	DAZAP2	Q15038	168 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	MPPED2	Q15777	294 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	PIGY	Q3MUY2	71 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	STEAP3	Q658P3	488 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	MEX3B	Q6ZN04	569 aa	Known RBP	12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	TMEM200A	Q86VY9	491 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	C11orf53	Q8IXP5	236 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	ELMOD3	Q96FG2	381 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534		Q96M66	194 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	TM2D1	Q9BX74	207 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	AUNIP	Q9H7T9	357 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	PALMD	Q9NP74	551 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	NKIRAS2	Q9NYR9	191 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	ZNF581	Q9P0T4	197 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	ABCA4	P78363	2273 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534		A0A1W2PQ09	198 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	METTL21EP	A6NDL7	271 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	CDIPT	O14735	213 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	SOCS1	O15524	211 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	LANCL1	O43813	399 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	ZNF780A	O75290	641 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	IGHV1-46	P01743	117 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	CSTB	P04080	98 aa	Known RBP	12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	IL7	P13232	177 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	GTF2F2	P13984	249 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	SERPINF1	P36955	418 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	CD200	P41217	278 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	ZNF672	Q499Z4	452 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	ZNF826P	Q6ZT77	177 aa		12.81	□□□□□ -0.36
PSMD13-215	ENST00000621534	MKX	Q8IYA7	352 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms