RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 NUDT9Q9BW91 350 aa4.49□□□□□ -1.69
MATR3-228ENST00000620916 TCEAL2Q9H3H9 227 aaPredicted RBP4.49□□□□□ -1.69
MATR3-228ENST00000620916 TAF9BQ9HBM6 251 aa4.49□□□□□ -1.69
MATR3-228ENST00000620916 PTGFRNQ9P2B2 879 aa4.49□□□□□ -1.69
MATR3-228ENST00000620916 MCTS1Q9ULC4 181 aaKnown RBP4.49□□□□□ -1.69
MATR3-228ENST00000620916 ZFHX2Q9C0A1 2572 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 SHISA3A0PJX4 238 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 GEMIN2O14893 280 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 DUX1O43812 170 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 RCBTB2O95199 551 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 CNIH1O95406 144 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 SEMA4FO95754 770 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 IGLC2P0DOY2 106 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 IGLC3P0DOY3 106 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ARSAP15289 507 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 RPS4Y1P22090 263 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 HTR1FP30939 366 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 PTGER1P34995 402 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 HNRNPA3P51991 378 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 RAB32Q13637 225 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ENDOGQ14249 297 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 SGCBQ16585 318 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ZNF678Q5SXM1 525 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ZNF776Q68DI1 518 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 SLC16A9Q7RTY1 509 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 OR5AU1Q8NGC0 362 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ZNF418Q8TF45 676 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 TMED6Q8WW62 240 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 NRGNQ92686 78 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 PIGTQ969N2 578 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 SEH1LQ96EE3 360 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 DUX5Q96PT3 197 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 HIST1H2AAQ96QV6 131 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 PIMREGQ9BSJ6 248 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 CTDSP1Q9GZU7 261 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 LYRM4Q9HD34 91 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 TMEM106BQ9NUM4 274 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ANKRD10Q9NXR5 420 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ERRFI1Q9UJM3 462 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 TRAPPC2LQ9UL33 140 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 YARS2Q9Y2Z4 477 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 KAT6AQ92794 2004 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 FAM186AA6NE01 2351 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 A0A0G2JK05 382 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 NPEPPSL1A6NEC2 478 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 RAB27BO00194 218 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 FCMRO60667 390 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ATP1B1P05026 303 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 HLA-DQB2P05538 268 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 NMBRP28336 390 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ARL2P36404 184 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 SRSF1Q07955 248 aaKnown RBP eCLIP4.48□□□□□ -1.694e-6■□□□□ 8.1
MATR3-228ENST00000620916 HSD52Q0P140 79 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 GNMTQ14749 295 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ANKRD55Q3KP44 614 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 SLC25A52Q3SY17 297 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 PLPP4Q5VZY2 271 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 TXNRD3NBQ6F5E7 133 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 SFRP4Q6FHJ7 346 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 SFXN4Q6P4A7 337 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 FOXI2Q6ZQN5 318 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 PARS2Q7L3T8 475 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 OR8I2Q8N0Y5 310 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 KLHDC1Q8N7A1 406 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 OR10G2Q8NGC3 310 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 OR4D11Q8NGI4 311 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 OR10G4Q8NGN3 311 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 OR2T27Q8NH04 317 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 PROKR1Q8TCW9 393 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 NDRG1Q92597 394 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 GNRHR2Q96P88 292 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 DNAJC27Q9NZQ0 273 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 PRSS50Q9UI38 385 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 REV3LO60673 3130 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 TMEM150BA6NC51 233 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 PYCARD-AS1I3L0S3 204 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 TM4SF5O14894 197 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 TAX1BP3O14907 124 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 TBX6O95947 436 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 MAS1P04201 325 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 GAPDHP04406 335 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 CSN2P05814 226 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 IL3P08700 152 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 DBHP09172 617 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 HOXB9P17482 250 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 ATP6V0CP27449 155 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 CD52P31358 61 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 MRPS34P82930 218 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 COL10A1Q03692 680 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 EXT1Q16394 746 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 ACKR1Q16570 336 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 IAH1Q2TAA2 248 aaPredicted RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 TMEM41BQ5BJD5 291 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 TMEM128Q5BJH2 165 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 MEPCEQ7L2J0 689 aaKnown RBP4.48□□□□□ -1.69
MATR3-228ENST00000620916 LGI4Q8N135 537 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 MUC15Q8N387 334 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 OR4K17Q8NGC6 315 aa4.48□□□□□ -1.69
MATR3-228ENST00000620916 OR1B1Q8NGR6 318 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms