RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SSSCA1O60232 199 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 CNOT4O95628 575 aaKnown RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 BGLAPP02818 100 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 GAPDHP04406 335 aaKnown RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 CELA2BP08218 269 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 SEC11BP0C7V7 166 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 EPHA1P21709 976 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 FGF7P21781 194 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 ATP6V0CP27449 155 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 GNRHRP30968 328 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 AKT2P31751 481 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 P2RY1P47900 373 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 RPL29P47914 159 aaKnown RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 ZNF121P58317 390 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 MLF1P58340 268 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 CLRN1P58418 232 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 SLC26A5P58743 744 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 TFF2Q03403 129 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 ELOBQ15370 118 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 ADIRFQ15847 76 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 SLC22A25Q6T423 547 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 CMTM1Q8IZ96 169 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 COMMD1Q8N668 190 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 OR11L1Q8NGX0 322 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 OR14L1PQ8NHC6 308 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 RBM14Q96PK6 669 aaKnown RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 FAAP24Q9BTP7 215 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 WWTR1Q9GZV5 400 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 THAP10Q9P2Z0 257 aaPredicted RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 OR14J1Q9UGF5 321 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 LAMP3Q9UQV4 416 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 STRAPQ9Y3F4 350 aaKnown RBP5.88□□□□□ -1.47
LMO3-235ENST00000616247 ESPL1Q14674 2120 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 MYO7BQ6PIF6 2116 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 SDK2Q58EX2 2172 aa5.88□□□□□ -1.47
LMO3-235ENST00000616247 A0A1W2PR80 420 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 GPR137BO60478 399 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 ADH1BP00325 375 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 FCARP24071 287 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 ARL4DP49703 201 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 FGF8P55075 233 aaPredicted RBP5.87□□□□□ -1.47
LMO3-235ENST00000616247 SPCS3P61009 180 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 HERV-K104P61576 105 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 HHEXQ03014 270 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 RUNX3Q13761 415 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 FZD2Q14332 565 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 MPV17LQ2QL34 196 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 VAX1Q5SQQ9 334 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 LFNGQ8NES3 379 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 GALNT14Q96FL9 552 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 TPSD1Q9BZJ3 242 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 CBLN4Q9NTU7 201 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 BRWD1Q9NSI6 2320 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 CACNA1DQ01668 2161 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 TMEM14DPA8MWL7 114 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 FTCDNL1E5RQL4 147 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 HMGB3O15347 200 aaKnown RBP5.87□□□□□ -1.47
LMO3-235ENST00000616247 CXCL10P02778 98 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 HPNP05981 417 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 FAHP16930 419 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 APOBEC1P41238 236 aaKnown RBP5.87□□□□□ -1.47
LMO3-235ENST00000616247 RNF4P78317 190 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 FOXK1P85037 733 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 NSDHLQ15738 373 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 TMEM176BQ3YBM2 270 aaPredicted RBP5.87□□□□□ -1.47
LMO3-235ENST00000616247 LGI3Q8N145 548 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.87□□□□□ -1.47
LMO3-235ENST00000616247 PTX4Q96A99 478 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 GPR87Q9BY21 358 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 TMEM184BQ9Y519 407 aaPredicted RBP5.87□□□□□ -1.47
LMO3-235ENST00000616247 LRRK1Q38SD2 2015 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 EML5Q05BV3 1969 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 TLCD2A6NGC4 264 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 CEBPZOSA8MTT3 80 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 PLPP3O14495 311 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 PGA3P0DJD8 388 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 HOXB2P14652 356 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 SFTPDP35247 375 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 SLC6A8P48029 635 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 TM4SF4P48230 202 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 LBX1P52954 281 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 ERVS71-1P61550 626 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 KISS1Q15726 138 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 PCK2Q16822 640 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 ZNF66Q6ZN08 573 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 OR5C1Q8NGR4 320 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 HOXB13Q92826 284 aaPredicted RBP5.87□□□□□ -1.47
LMO3-235ENST00000616247 ZNF775Q96BV0 537 aaPredicted RBP5.87□□□□□ -1.47
LMO3-235ENST00000616247 HIST1H2BLQ99880 126 aa5.87□□□□□ -1.47
LMO3-235ENST00000616247 IGHV3-20A0A0C4DH32 117 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 XKRY2A2RUG3 117 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 EREGO14944 169 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 DUSP1P28562 367 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 THBS4P35443 961 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 CD200P41217 278 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 PCP4P48539 62 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 POLR2HP52434 150 aaKnown RBP5.86□□□□□ -1.47
LMO3-235ENST00000616247 HLA-DRB3P79483 266 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 HSF1Q00613 529 aa5.86□□□□□ -1.47
LMO3-235ENST00000616247 EWSR1Q01844 656 aaKnown RBP eCLIP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms