RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ANGPTL5Q86XS5 388 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 CALHM1Q8IU99 346 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 BATF2Q8N1L9 274 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 FAM110DQ8TAY7 271 aaPredicted RBP6.19□□□□□ -1.42
CUX1-219ENST00000606749 PIFOQ8TCI5 191 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 IL4I1Q96RQ9 567 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 PRRG3Q9BZD7 231 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 MOB1AQ9H8S9 216 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 KRT84Q9NSB2 600 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 USE1Q9NZ43 259 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 POLDIP2Q9Y2S7 368 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 SIGLEC9Q9Y336 463 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 CMYA5Q8N3K9 4069 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 WNK1Q9H4A3 2382 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 hCG_1809904A0A1W2PP81 198 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 A0A1W2PPE2 198 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 A0A1W2PQL4 384 aaPredicted RBP6.18□□□□□ -1.42
CUX1-219ENST00000606749 A0A1W2PR64 198 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 A0A1W2PRV1 198 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 MEGF11A6BM72 1044 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 FAM90A8PA6NJQ4 464 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 C17orf98A8MV24 154 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 K7N7A8 449 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 RPP14O95059 124 aaKnown RBP6.18□□□□□ -1.42
CUX1-219ENST00000606749 CSF1P09603 554 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 OR2T7P0C7T2 308 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 CCL1P22362 96 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 POLR2IP36954 125 aaKnown RBP6.18□□□□□ -1.42
CUX1-219ENST00000606749 BMXP51813 675 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 EFNB2P52799 333 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 DLX6P56179 175 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 LGALS4P56470 323 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 COL10A1Q03692 680 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 BNIP1Q12981 228 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 IL24Q13007 206 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 ZNF273Q14593 569 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 UBE2V2Q15819 145 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 ODF4Q2M2E3 257 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 C2orf68Q2NKX9 166 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 AMIGO2Q86SJ2 522 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 CATSPERDQ86XM0 798 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 ZDHHC13Q8IUH4 622 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 GID4Q8IVV7 300 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 YIPF7Q8N8F6 280 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 TRMT10AQ8TBZ6 339 aaKnown RBP6.18□□□□□ -1.42
CUX1-219ENST00000606749 TBX5Q99593 518 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 PKIBQ9C010 78 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 RAB18Q9NP72 206 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 FAM53CQ9NYF3 392 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 MTCH1Q9NZJ7 389 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 OR14J1Q9UGF5 321 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 WARS2Q9UGM6 360 aaKnown RBP6.18□□□□□ -1.42
CUX1-219ENST00000606749 FOXJ3Q9UPW0 622 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 AP4S1Q9Y587 144 aa6.18□□□□□ -1.42
CUX1-219ENST00000606749 IGKV1-27A0A075B6S5 117 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 FAM230AA0A1W2PPH8 454 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 METTL15A6NJ78 407 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 VGLL3A8MV65 326 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 F8VVB4 439 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 F8VWA3 439 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 H3BSH0 61 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 ZNF737O75373 536 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 SULT1C4O75897 302 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 APOL3O95236 402 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 KRT8P05787 483 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 CHRM2P08172 466 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 ZNF728P0DKX0 622 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 PIPP12273 146 aaPredicted RBP6.17□□□□□ -1.42
CUX1-219ENST00000606749 COX7A1P24310 79 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 FASP25445 335 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 HTR1FP30939 366 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 RAB13P51153 203 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 HERPUD1Q15011 391 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 C11orf88Q6PI97 169 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 CCBE1Q6UXH8 406 aaPredicted RBP6.17□□□□□ -1.42
CUX1-219ENST00000606749 Q6ZTK2 550 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 LHFPL4Q7Z7J7 247 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 C1QL4Q86Z23 238 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 DYNAPQ8N1N2 210 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 OR4C13Q8NGP0 309 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 CFHR4Q92496 578 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 MALSU1Q96EH3 234 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 CIB1Q99828 191 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 GABARAPL1Q9H0R8 117 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 RANBP3Q9H6Z4 567 aaPredicted RBP6.17□□□□□ -1.42
CUX1-219ENST00000606749 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.17□□□□□ -1.42
CUX1-219ENST00000606749 SLC7A11Q9UPY5 501 aa6.17□□□□□ -1.42
CUX1-219ENST00000606749 A0A0G2JK05 382 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 MEX3AA1L020 520 aaKnown RBP6.16□□□□□ -1.42
CUX1-219ENST00000606749 DYNC1I1O14576 645 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 SYT7O43581 403 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 CHST1O43916 411 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 INMTO95050 263 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 SERPINA3P01011 423 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 OPN1MWP04001 364 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 ARG1P05089 322 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 OPN1MW2P0DN77 364 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 OPN1MW3P0DN78 364 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 ATP6V1E1P36543 226 aa6.16□□□□□ -1.42
CUX1-219ENST00000606749 FUT6P51993 359 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms