RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 RDH10Q8IZV5 341 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 ZNF561Q8N587 486 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 SETD9Q8NE22 299 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 TRMT10AQ8TBZ6 339 aaKnown RBP14.16□□□□□ -0.14
HERC3-214ENST00000601319 GATAD2BQ8WXI9 593 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 ADAT3Q96EY9 351 aaPredicted RBP14.16□□□□□ -0.14
HERC3-214ENST00000601319 ZNF488Q96MN9 340 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 IGKV1-27A0A075B6S5 117 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 IGHV1-69DA0A0B4J2H0 117 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 FAM230AA0A1W2PPH8 454 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 IRGMA1A4Y4 181 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 TMEM89A2RUT3 159 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 SLC1A7O00341 560 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 KNG1P01042 644 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 IGHV1-69P01742 117 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 RNASE1P07998 156 aaKnown RBP14.15□□□□□ -0.14
HERC3-214ENST00000601319 LIMS3P0CW19 117 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 LIMS4P0CW20 117 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 ADARB1P78563 741 aaKnown RBP14.15□□□□□ -0.14
HERC3-214ENST00000601319 BAMBIQ13145 260 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 IL18R1Q13478 541 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 LRRC36Q1X8D7 754 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 C1orf122Q6ZSJ8 110 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 VMO1Q7Z5L0 202 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 ANGPTL5Q86XS5 388 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 CD177Q8N6Q3 437 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 ZNRF1Q8ND25 227 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 TMEM185AQ8NFB2 350 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 NPRL2Q8WTW4 380 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 H1FXQ92522 213 aaKnown RBP14.15□□□□□ -0.14
HERC3-214ENST00000601319 SPSB1Q96BD6 273 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 BORCS8Q96FH0 119 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 ISG20L2Q9H9L3 353 aaKnown RBP14.15□□□□□ -0.14
HERC3-214ENST00000601319 UNKLQ9H9P5 680 aaKnown RBP14.15□□□□□ -0.14
HERC3-214ENST00000601319 ONECUT1Q9UBC0 465 aa14.15□□□□□ -0.14
HERC3-214ENST00000601319 IGKV1-9A0A0C4DH69 117 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 RFPL4AA6NLU0 287 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 TMEM212A6NML5 194 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 RFPL4AL1F8VTS6 287 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 M0R1W7 72 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 CCDC159P0C7I6 412 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 ZNF20P17024 532 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 NDUFB7P17568 137 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 PRKACBP22694 351 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 RBP2P50120 134 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 SMN1Q16637 294 aaKnown RBP14.14□□□□□ -0.15
HERC3-214ENST00000601319 DEFB112Q30KQ8 113 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 OGFRL1Q5TC84 451 aaPredicted RBP14.14□□□□□ -0.15
HERC3-214ENST00000601319 RUSC1-AS1Q66K80 236 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 Q8IYB0 196 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 ZNF676Q8N7Q3 588 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 OR51A4Q8NGJ6 313 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 OR13C3Q8NGS6 347 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 OR10AC1Q8NH08 325 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 CYGBQ8WWM9 190 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 LHX4Q969G2 390 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 CEP19Q96LK0 163 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 FAM234AQ9H0X4 552 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 NOX4Q9NPH5 578 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 HSPE1-MOB4S4R3N1 261 aa14.14□□□□□ -0.15
HERC3-214ENST00000601319 ZFPL1O95159 310 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 MT-ND2P03891 347 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 ATF1P18846 271 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 AZGP1P25311 298 aaKnown RBP14.13□□□□□ -0.15
HERC3-214ENST00000601319 DCKP27707 260 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 PRDX2P32119 198 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 GBX2P52951 348 aaPredicted RBP14.13□□□□□ -0.15
HERC3-214ENST00000601319 ATP1B3P54709 279 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 SLC9A3R2Q15599 337 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 LHFPL2Q6ZUX7 228 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 DHRSXQ8N5I4 330 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 Q8N7P7 452 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 CNIH3Q8TBE1 160 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 SLC25A28Q96A46 364 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 FGGYQ96C11 551 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 SEBOXQ9HB31 216 aaPredicted RBP14.13□□□□□ -0.15
HERC3-214ENST00000601319 MTCH1Q9NZJ7 389 aa14.13□□□□□ -0.15
HERC3-214ENST00000601319 SOX21Q9Y651 276 aaPredicted RBP14.13□□□□□ -0.15
HERC3-214ENST00000601319 MDFIC2A0A1B0GVS7 189 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 A0A1W2PQ09 198 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 E9PI62 339 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 H0YAE9 185 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 CLIC3O95833 236 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 GUCA2AQ02747 115 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 NCR3LG1Q68D85 454 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 SLC25A26Q70HW3 274 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 TMEM86BQ8N661 226 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 OR5AK2Q8NH90 309 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 RPS4Y2Q8TD47 263 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 GCDHQ92947 438 aaPredicted RBP14.12□□□□□ -0.15
HERC3-214ENST00000601319 OPALINQ96PE5 141 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 COMMD4Q9H0A8 199 aa14.12□□□□□ -0.15
HERC3-214ENST00000601319 METTL8Q9H825 291 aaKnown RBP14.12□□□□□ -0.15
HERC3-214ENST00000601319 ELL3Q9HB65 397 aaPredicted RBP14.12□□□□□ -0.15
HERC3-214ENST00000601319 DIMT1Q9UNQ2 313 aaKnown RBP14.12□□□□□ -0.15
HERC3-214ENST00000601319 TRBV2A0A0J9YWF9 115 aa14.11□□□□□ -0.15
HERC3-214ENST00000601319 ALX3O95076 343 aa14.11□□□□□ -0.15
HERC3-214ENST00000601319 CYB5AP00167 134 aa14.11□□□□□ -0.15
HERC3-214ENST00000601319 HKR1P10072 659 aa14.11□□□□□ -0.15
HERC3-214ENST00000601319 CAPGP40121 348 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms