RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 OR10H4Q8NGA5 316 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 RORBQ92753 470 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 EME1Q96AY2 570 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 ZNF488Q96MN9 340 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 TBX5Q99593 518 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 ADI1Q9BV57 179 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 RIBC2Q9H4K1 309 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 HEXA-AS1Q9H8Q6 139 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 PLEKHA1Q9HB21 404 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 C19orf12Q9NSK7 152 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 PKD1L1Q8TDX9 2849 aa12.91□□□□□ -0.34
VRK3-221ENST00000600284 A0A1W2PRD5 423 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 A0A1W2PRF3 423 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 A0A1W2PRM7 423 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 A6NIN4 97 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 TIMM23O14925 209 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 GATBO75879 557 aaKnown RBP12.9□□□□□ -0.34
VRK3-221ENST00000600284 SERPINA3P01011 423 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 TK1P04183 234 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 FUT6P51993 359 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 PROK1P58294 105 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 PRB3Q04118 309 aaPredicted RBP12.9□□□□□ -0.34
VRK3-221ENST00000600284 AANATQ16613 207 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 SLC25A30Q5SVS4 291 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 TMEM200BQ69YZ2 307 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 DHRS7BQ6IAN0 325 aaPredicted RBP12.9□□□□□ -0.34
VRK3-221ENST00000600284 Q6ZSV7 163 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 KCTD20Q7Z5Y7 419 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 MEGF9Q9H1U4 602 aa12.9□□□□□ -0.34
VRK3-221ENST00000600284 CHRM2P08172 466 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 UBCP0CG48 685 aaKnown RBP12.89□□□□□ -0.35
VRK3-221ENST00000600284 ISL1P61371 349 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 SRSF4Q08170 494 aaKnown RBP12.89□□□□□ -0.35
VRK3-221ENST00000600284 UBE2V2Q15819 145 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 FAM220AQ7Z4H9 259 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 ANGPTL5Q86XS5 388 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 MKXQ8IYA7 352 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 PNKDQ8N490 385 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 C11orf42Q8N5U0 333 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 PP6455Q8WZ26 134 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 CHST5Q9GZS9 411 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 SEBOXQ9HB31 216 aaPredicted RBP12.89□□□□□ -0.35
VRK3-221ENST00000600284 USE1Q9NZ43 259 aa12.89□□□□□ -0.35
VRK3-221ENST00000600284 FAM230AA0A1W2PPH8 454 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 SAC3D1A6NKF1 404 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 K7N7A8 449 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 M0QZ24 198 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 WIPF1O43516 503 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 ANGPTL7O43827 346 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 ALPLP05186 524 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 ODF4Q2M2E3 257 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 MEDAGQ5VYS4 303 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 PRSS35Q8N3Z0 413 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 TRMT10AQ8TBZ6 339 aaKnown RBP12.88□□□□□ -0.35
VRK3-221ENST00000600284 AJUBAQ96IF1 538 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 HRASLS5Q96KN8 279 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 CEP19Q96LK0 163 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 IMPAD1Q9NX62 359 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 OR14J1Q9UGF5 321 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 ORC6Q9Y5N6 252 aa12.88□□□□□ -0.35
VRK3-221ENST00000600284 APOL3O95236 402 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 CEBPDP49716 269 aaPredicted RBP12.87□□□□□ -0.35
VRK3-221ENST00000600284 KRTAP10-3P60369 221 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 ERVFRD-1P60508 538 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 SNRPGP62308 76 aaKnown RBP12.87□□□□□ -0.35
VRK3-221ENST00000600284 ACTC1P68032 377 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 ACTA1P68133 377 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 ZNF85Q03923 595 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 CNN3Q15417 329 aaKnown RBP12.87□□□□□ -0.35
VRK3-221ENST00000600284 TMEM244Q5VVB8 128 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 ZFP1Q6P2D0 407 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 Q8IYB0 196 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 OR4M1Q8NGD0 313 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 PYDC1Q8WXC3 89 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 SSX3Q99909 188 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 MTCH1Q9NZJ7 389 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 FBLN5Q9UBX5 448 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 GNG8Q9UK08 70 aa12.87□□□□□ -0.35
VRK3-221ENST00000600284 IGKV1-27A0A075B6S5 117 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 LOC107986453A0A1B0GWG9 222 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 C17orf98A8MV24 154 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 E9PQ18 207 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 H3BUX3 64 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 J3QRE1 110 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 ZNF737O75373 536 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 RBP4P02753 201 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 ISG15P05161 165 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 ATP1B3P54709 279 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 LGALS4P56470 323 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 COL10A1Q03692 680 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 LRRC75BQ2VPJ9 315 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 TP53I3Q53FA7 332 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 ASPHD2Q6ICH7 369 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 FDX2Q6P4F2 183 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 EGFL6Q8IUX8 553 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
VRK3-221ENST00000600284 ENTHD1Q8IYW4 607 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms