RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 SYT7O43581 403 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 NOS1APO75052 506 aaPredicted RBP7.98□□□□□ -1.13
VRK3-216ENST00000599342 GATBO75879 557 aaKnown RBP7.98□□□□□ -1.13
VRK3-216ENST00000599342 TSPAN15O95858 294 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 TK1P04183 234 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 CSF1P09603 554 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 PIPP12273 146 aaPredicted RBP7.98□□□□□ -1.13
VRK3-216ENST00000599342 FCGR1AP12314 374 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 CCL3L1P16619 93 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 COX7A1P24310 79 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 MPZP25189 248 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 EPHA2P29317 976 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 ATP6V1E1P36543 226 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 EFNB1P98172 346 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 IL24Q13007 206 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 LY6EQ16553 131 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 C1orf146Q5VVC0 180 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 TMEM200BQ69YZ2 307 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 KDM4DQ6B0I6 523 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 SLC35E4Q6ICL7 350 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 HCP5Q6MZN7 132 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 C11orf88Q6PI97 169 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 Q6ZTK2 550 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 FAM220AQ7Z4H9 259 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 ASCC1Q8N9N2 400 aaKnown RBP7.98□□□□□ -1.13
VRK3-216ENST00000599342 OR10H4Q8NGA5 316 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 OR2T6Q8NHC8 308 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 C17orf50Q8WW18 174 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 RORBQ92753 470 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 PKIBQ9C010 78 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 GABARAPL1Q9H0R8 117 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 MEGF9Q9H1U4 602 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 HES4Q9HCC6 221 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 FBLN5Q9UBX5 448 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 SLC22A13Q9Y226 551 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 AP4S1Q9Y587 144 aa7.98□□□□□ -1.13
VRK3-216ENST00000599342 A0A1B0GTI1 187 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 A0A1W2PQL4 384 aaPredicted RBP7.97□□□□□ -1.13
VRK3-216ENST00000599342 H3BSH0 61 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 APOL3O95236 402 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 SERPINA3P01011 423 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 OR2T7P0C7T2 308 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 CCL1P22362 96 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 HTR1FP30939 366 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 BMXP51813 675 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 EDDM3BP56851 147 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 COL10A1Q03692 680 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 BNIP1Q12981 228 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 ZNF273Q14593 569 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 AANATQ16613 207 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 ZNF782Q6ZMW2 699 aaPredicted RBP7.97□□□□□ -1.13
VRK3-216ENST00000599342 LIAT1Q6ZQX7 453 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 Q6ZSR3 168 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 GDPD3Q7L5L3 318 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 SSX6Q7RTT6 188 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 AMIGO2Q86SJ2 522 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 CATSPERDQ86XM0 798 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 ANGPTL5Q86XS5 388 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 CALHM1Q8IU99 346 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 DTX3Q8N9I9 347 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 CCDC54Q8NEL0 328 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 OR13D1Q8NGV5 346 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 FAM110DQ8TAY7 271 aaPredicted RBP7.97□□□□□ -1.13
VRK3-216ENST00000599342 BORCS8Q96FH0 119 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 CEP19Q96LK0 163 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 CIB1Q99828 191 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 NPFFR1Q9GZQ6 430 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 RIBC2Q9H4K1 309 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 RANBP3Q9H6Z4 567 aaPredicted RBP7.97□□□□□ -1.13
VRK3-216ENST00000599342 MGAM2Q2M2H8 2515 aa7.97□□□□□ -1.13
VRK3-216ENST00000599342 METTL15A6NJ78 407 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 K7N7A8 449 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 SULT1C4O75897 302 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 ATP5HO75947 161 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 ARG1P05089 322 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 CHRM2P08172 466 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 UBCP0CG48 685 aaKnown RBP7.96□□□□□ -1.14
VRK3-216ENST00000599342 PAX6P26367 422 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 FUT6P51993 359 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 CDC42P60953 191 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 ERVK11-1P61568 191 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 HERPUD1Q15011 391 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 CNN3Q15417 329 aaKnown RBP7.96□□□□□ -1.14
VRK3-216ENST00000599342 OR8J1Q8NGP2 316 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 PPP1R35Q8TAP8 253 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 RFKQ969G6 155 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 SLAMF9Q96A28 289 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 FOXRED1Q96CU9 486 aaPredicted RBP7.96□□□□□ -1.14
VRK3-216ENST00000599342 C10orf35Q96D05 121 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 NKX3-1Q99801 234 aaPredicted RBP7.96□□□□□ -1.14
VRK3-216ENST00000599342 GABARAPL3Q9BY60 117 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 CHST5Q9GZS9 411 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 ABCB10Q9NRK6 738 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 GNG8Q9UK08 70 aa7.96□□□□□ -1.14
VRK3-216ENST00000599342 LOC107986453A0A1B0GWG9 222 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 C17orf98A8MV24 154 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 CIB2O75838 187 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 INMTO95050 263 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 CYB5AP00167 134 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 RBP4P02753 201 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms