RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 SFT2D2O95562 160 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 RRADP55042 308 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 CLEC18BQ6UXF7 455 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 TMPRSS7Q7RTY8 843 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 CALHM1Q8IU99 346 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 FBXL14Q8N1E6 418 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 OR51F2Q8NH61 342 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 SPRR3Q9UBC9 169 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 AK3Q9UIJ7 227 aa17.03■□□□□ 0.32
MBD3-209ENST00000592012 SPAARA0A1B0GVQ0 90 aa17.02■□□□□ 0.32
MBD3-209ENST00000592012 CD79AP11912 226 aa17.02■□□□□ 0.32
MBD3-209ENST00000592012 GLRA1P23415 457 aa17.02■□□□□ 0.32
MBD3-209ENST00000592012 THOC7Q6I9Y2 204 aaKnown RBP17.02■□□□□ 0.32
MBD3-209ENST00000592012 OR10AD1Q8NGE0 317 aa17.02■□□□□ 0.32
MBD3-209ENST00000592012 SULT4A1Q9BR01 284 aa17.02■□□□□ 0.32
MBD3-209ENST00000592012 ZDHHC11Q9H8X9 412 aa17.02■□□□□ 0.32
MBD3-209ENST00000592012 EDARQ9UNE0 448 aa17.02■□□□□ 0.32
MBD3-209ENST00000592012 TNFSF18Q9UNG2 199 aa17.02■□□□□ 0.32
MBD3-209ENST00000592012 TRGV5A0A0B4J1U4 118 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 RRP8O43159 456 aaKnown RBP17.02■□□□□ 0.31
MBD3-209ENST00000592012 CALCRP30988 508 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 ARR3P36575 388 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 NSUN5P2Q63ZY6 315 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 OR56B2PQ8NGI1 322 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 PRSS50Q9UI38 385 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 GPR160Q9UJ42 338 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 ST3GAL6Q9Y274 331 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 CSAG2Q9Y5P2 127 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 DMXL1Q9Y485 3027 aa17.02■□□□□ 0.31
MBD3-209ENST00000592012 EEF1E1-BLOC1S5C9J1V9 151 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 NKX2-8O15522 239 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 RRASP10301 218 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 P2RX3P56373 397 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 ALKAL2Q6UX46 152 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 VASH2Q86V25 355 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 TMEM178AQ8NBL3 297 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 APOBEC3DQ96AK3 386 aaPredicted RBP17.01■□□□□ 0.31
MBD3-209ENST00000592012 POM121L2Q96KW2 1035 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 KIF25Q9UIL4 384 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 ANXA10Q9UJ72 324 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 A0A0D9SG52 128 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 RPS2P15880 293 aaKnown RBP17.01■□□□□ 0.31
MBD3-209ENST00000592012 SERPINF1P36955 418 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 TNFSF10P50591 281 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 SURF2Q15527 256 aaPredicted RBP17.01■□□□□ 0.31
MBD3-209ENST00000592012 ZNF660Q6AZW8 331 aaPredicted RBP17.01■□□□□ 0.31
MBD3-209ENST00000592012 RFPL4BQ6ZWI9 263 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 SLC51BQ86UW2 128 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 MED12LQ86YW9 2145 aa17.01■□□□□ 0.31
MBD3-209ENST00000592012 CMSS1Q9BQ75 279 aaKnown RBP17.01■□□□□ 0.31
MBD3-209ENST00000592012 SS18L1O75177 396 aaPredicted RBP17■□□□□ 0.31
MBD3-209ENST00000592012 SRSF6Q13247 344 aaKnown RBP17■□□□□ 0.31
MBD3-209ENST00000592012 SLC9A3R2Q15599 337 aa17■□□□□ 0.31
MBD3-209ENST00000592012 BRICD5Q6PL45 260 aa17■□□□□ 0.31
MBD3-209ENST00000592012 COMMD7Q86VX2 200 aa17■□□□□ 0.31
MBD3-209ENST00000592012 ZNF611Q8N823 705 aa17■□□□□ 0.31
MBD3-209ENST00000592012 SCARB1Q8WTV0 552 aa17■□□□□ 0.31
MBD3-209ENST00000592012 C12orf49Q9H741 205 aa17■□□□□ 0.31
MBD3-209ENST00000592012 ASCL3Q9NQ33 180 aa17■□□□□ 0.31
MBD3-209ENST00000592012 RDH8Q9NYR8 311 aa17■□□□□ 0.31
MBD3-209ENST00000592012 CFAP47Q6ZTR5 3102 aa17■□□□□ 0.31
MBD3-209ENST00000592012 A0A0B4J2A0 478 aa17■□□□□ 0.31
MBD3-209ENST00000592012 C13orf42A0A1B0GVH6 325 aa17■□□□□ 0.31
MBD3-209ENST00000592012 C5orf51A6NDU8 294 aa17■□□□□ 0.31
MBD3-209ENST00000592012 IL18BPO95998 194 aa17■□□□□ 0.31
MBD3-209ENST00000592012 NGFP01138 241 aa17■□□□□ 0.31
MBD3-209ENST00000592012 DTYMKP23919 212 aa17■□□□□ 0.31
MBD3-209ENST00000592012 ARPC4P59998 168 aa17■□□□□ 0.31
MBD3-209ENST00000592012 ZNF345Q14585 488 aa17■□□□□ 0.31
MBD3-209ENST00000592012 KCNRGQ8N5I3 272 aa17■□□□□ 0.31
MBD3-209ENST00000592012 PAPOLGQ9BWT3 736 aaKnown RBP17■□□□□ 0.31
MBD3-209ENST00000592012 PCDHB16Q9NRJ7 776 aa17■□□□□ 0.31
MBD3-209ENST00000592012 CRIM1Q9NZV1 1036 aa17■□□□□ 0.31
MBD3-209ENST00000592012 SHPKQ9UHJ6 478 aa17■□□□□ 0.31
MBD3-209ENST00000592012 STARD10Q9Y365 291 aa17■□□□□ 0.31
MBD3-209ENST00000592012 OPRM1P35372 400 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 MALLQ13021 153 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 ANKRD55Q3KP44 614 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 SLC25A26Q70HW3 274 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 WBP1Q96G27 269 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 ZNF2Q9BSG1 426 aaPredicted RBP16.99■□□□□ 0.31
MBD3-209ENST00000592012 DECR2Q9NUI1 292 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 PQLC2LA1A4F0 135 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 RNF222A6NCQ9 220 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 SLC22A20A6NK97 555 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 OR2F2O95006 317 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 CRHP06850 196 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 FCGR3AP08637 254 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 NPBWR2P48146 333 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 OR2F1Q13607 317 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 DAZAP2Q15038 168 aaPredicted RBP16.99■□□□□ 0.31
MBD3-209ENST00000592012 NMES1Q9C002 83 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 FGF23Q9GZV9 251 aaPredicted RBP16.99■□□□□ 0.31
MBD3-209ENST00000592012 RAB18Q9NP72 206 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 PRR13Q9NZ81 148 aa16.99■□□□□ 0.31
MBD3-209ENST00000592012 TNRC6AQ8NDV7 1962 aaKnown RBP16.98■□□□□ 0.31
MBD3-209ENST00000592012 NMBP08949 121 aa16.98■□□□□ 0.31
MBD3-209ENST00000592012 RBM11P57052 281 aaKnown RBP16.98■□□□□ 0.31
MBD3-209ENST00000592012 PLP2Q04941 152 aa16.98■□□□□ 0.31
MBD3-209ENST00000592012 PRDX4Q13162 271 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms