RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 LHFPL6Q9Y693 200 aa7.82□□□□□ -1.16
BRCA1-226ENST00000591534 TANC2Q9HCD6 1990 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 IGHV1-69DA0A0B4J2H0 117 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 CENPVL3A0A0U1RRI6 287 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 CCDC160A6NGH7 325 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 OOEPA6NGQ2 149 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 GGT3PA6NGU5 568 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 FAM183AA6NL82 134 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 SLC22A1O15245 554 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ADAM20O43506 726 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 IGHV1-69P01742 117 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 PSKH1P11801 424 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ANOS1P23352 680 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 PSMB9P28065 219 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 PMELP40967 661 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ALDH3B2P48448 385 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 SERPINB10P48595 397 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 TGM4P49221 684 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 GRB2P62993 217 aaKnown RBP7.81□□□□□ -1.16
BRCA1-226ENST00000591534 MAB21L1Q13394 359 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 NEDD8Q15843 81 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 TAF9Q16594 264 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ZNF829Q3KNS6 432 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-226ENST00000591534 CORO6Q6QEF8 472 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 LYPD2Q6UXB3 125 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ZNF841Q6ZN19 808 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ERI1Q8IV48 349 aaKnown RBP7.81□□□□□ -1.16
BRCA1-226ENST00000591534 SLC35F2Q8IXU6 374 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 CMTM4Q8IZR5 234 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 OR6V1Q8N148 313 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 BOLLQ8N9W6 283 aaKnown RBP7.81□□□□□ -1.16
BRCA1-226ENST00000591534 CYB561A3Q8NBI2 242 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 OTOSQ8NHW6 89 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 MUL1Q969V5 352 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 MGLLQ99685 303 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ADAT1Q9BUB4 502 aaKnown RBP7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ALG8Q9BVK2 526 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 COMMD4Q9H0A8 199 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ADGRL4Q9HBW9 690 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 NEK6Q9HC98 313 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 TCF7L1Q9HCS4 588 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 AMBNQ9NP70 447 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 BABAM2Q9NXR7 383 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 MRPL15Q9P015 296 aaKnown RBP7.81□□□□□ -1.16
BRCA1-226ENST00000591534 ZNF391Q9UJN7 358 aa7.81□□□□□ -1.16
BRCA1-226ENST00000591534 IGLV1-36A0A0B4J1U3 117 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 A0A1B0GVI7 797 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 hCG_1807616A0A1W2PRN6 198 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 A6NLC8 198 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 CD300LBA8K4G0 201 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 M0R135 149 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 MT-ND2P03891 347 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 TFAP2AP05549 437 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 SFTPBP07988 381 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 CA6P23280 308 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 DDOSTP39656 456 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 RPS27P42677 84 aaKnown RBP7.8□□□□□ -1.16
BRCA1-226ENST00000591534 PSMD7P51665 324 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 RIDAP52758 137 aaKnown RBP7.8□□□□□ -1.16
BRCA1-226ENST00000591534 ROM1Q03395 351 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 IRF3Q14653 427 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 TAF13Q15543 124 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 SMN1Q16637 294 aaKnown RBP7.8□□□□□ -1.16
BRCA1-226ENST00000591534 PCK2Q16822 640 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 C2orf68Q2NKX9 166 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 KRTAP27-1Q3LI81 207 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 FAM201AQ5SY85 155 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 PRAMEF6Q5VXH4 476 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 SFRP4Q6FHJ7 346 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-226ENST00000591534 RPL22L1Q6P5R6 122 aaKnown RBP7.8□□□□□ -1.16
BRCA1-226ENST00000591534 DRAM2Q6UX65 266 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 CROCCP3Q8IVE0 287 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 ZNF679Q8IYX0 411 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 DTX3Q8N9I9 347 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 SLC26A10Q8NG04 563 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 OR13F1Q8NGS4 319 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 OR6N2Q8NGY6 317 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 LHX4Q969G2 390 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 ZNF799Q96GE5 643 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 CNTD2Q9H8S5 307 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 C1orf123Q9NWV4 160 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 RSL24D1Q9UHA3 163 aaKnown RBP7.8□□□□□ -1.16
BRCA1-226ENST00000591534 CYB5R1Q9UHQ9 305 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 SSR3Q9UNL2 185 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 SOX21Q9Y651 276 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-226ENST00000591534 KPTNQ9Y664 436 aa7.8□□□□□ -1.16
BRCA1-226ENST00000591534 TGP01266 2768 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 ARHGAP32A7KAX9 2087 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 CCDC182A6NF36 153 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 METTL15A6NJ78 407 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 TMEM212A6NML5 194 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 ANKRD30BLA7E2S9 258 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 ZNF878C9JN71 531 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 J3QRE1 110 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 ZNF593O00488 134 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-226ENST00000591534 GPR137BO60478 399 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 ARL6IP5O75915 188 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 CLPXO76031 633 aa7.79□□□□□ -1.16
BRCA1-226ENST00000591534 PTBP3O95758 552 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms