RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NRASP01111 189 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 IFNA2P01563 188 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 TDGF1P13385 188 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 DTYMKP23919 212 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 GABRR1P24046 479 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 HTR5AP47898 357 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 SLC9A3R2Q15599 337 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 H3F3CQ6NXT2 135 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 LHFPL1Q86WI0 220 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 STPG2Q8N412 459 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-206ENST00000589117 PIGTQ969N2 578 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 FOXB1Q99853 325 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 NECAP2Q9NVZ3 263 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 DNAJB11Q9UBS4 358 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 CCDC187A0A096LP49 1063 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 FAM230AA0A1W2PPH8 454 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 RAB19A4D1S5 217 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 RNF222A6NCQ9 220 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 XRCC2O43543 280 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 SYNGR3O43761 229 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 RAD51DO75771 328 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 HPNP05981 417 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF883P0CG24 379 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 CRYGSP22914 178 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 GDF1P27539 372 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 FUT6P51993 359 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 RSPO1Q2MKA7 263 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 CCDC157Q569K6 752 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 BEX5Q5H9J7 111 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 PRSS54Q6PEW0 395 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 C1QL2Q7Z5L3 287 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 PPP1R32Q7Z5V6 425 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 BAP18Q8IXM2 172 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF100Q8IYN0 542 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ESX1Q8N693 406 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 OR10D3Q8NH80 312 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 STOML3Q8TAV4 291 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 MARC2Q969Z3 335 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 LINC00052Q96N35 136 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 RTBDNQ9BSG5 229 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 SRXN1Q9BYN0 137 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 SHARPINQ9H0F6 387 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 BCO1Q9HAY6 547 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ZFP57Q9NU63 452 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 FBXO9Q9UK97 447 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 OSGIN2Q9Y236 505 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 LOXL2Q9Y4K0 774 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF850A8MQ14 1090 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 FOXI3A8MTJ6 420 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 E9PLN8 166 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 SDCBPO00560 298 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 CXCL13O43927 109 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 MRPL33O75394 65 aaKnown RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 KNG1P01042 644 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 DBHP09172 617 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 GLRA1P23415 457 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 B3GALT5-AS1P59052 145 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ZXDAP98168 799 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 NKAPLQ5M9Q1 402 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ABHD17BQ5VST6 288 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 AADACL3Q5VUY0 350 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ELP2Q6IA86 826 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF774Q6NX45 483 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 RPUSD3Q6P087 351 aaKnown RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 RAB11FIP2Q7L804 512 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 CXorf67Q86X51 503 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ZSCAN4Q8NAM6 433 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 RELL2Q8NC24 303 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 OR13G1Q8NGZ3 307 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF775Q96BV0 537 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 PIK3IP1Q96FE7 263 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 WBP1Q96G27 269 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 CMSS1Q9BQ75 279 aaKnown RBP6.44□□□□□ -1.38
ZNF540-206ENST00000589117 SYT3Q9BQG1 590 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 DDA1Q9BW61 102 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 GPR87Q9BY21 358 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 FN3KRPQ9HA64 309 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 GPR173Q9NS66 373 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ATPIF1Q9UII2 106 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 ANXA10Q9UJ72 324 aa6.44□□□□□ -1.38
ZNF540-206ENST00000589117 VCANP13611 3396 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF716A6NP11 495 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 PRSS44E7EML9 344 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 F8VVB4 439 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 F8VWA3 439 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 CYTIPO60759 359 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 SCO1O75880 301 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 TUSC2O75896 110 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 CTSDP07339 412 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-206ENST00000589117 HOXD4P09016 255 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-206ENST00000589117 OR5H8P0DN80 308 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 B4GALT1P15291 398 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF32P17041 273 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 RGS19P49795 217 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 SIGLEC14Q08ET2 396 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 MALLQ13021 153 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 CEACAM16Q2WEN9 425 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 SNAI3Q3KNW1 292 aa6.43□□□□□ -1.38
ZNF540-206ENST00000589117 ABCA11PQ4W5N1 156 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms