RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 USP43Q70EL4 1123 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 EGFL6Q8IUX8 553 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 SIGLECL1Q8N7X8 197 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 OR13C9Q8NGT0 318 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 OR5AK2Q8NH90 309 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 WDFY2Q96P53 400 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 ZNF649Q9BS31 505 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 CHCHD3Q9NX63 227 aaKnown RBP12.26□□□□□ -0.45
ATG4D-207ENST00000587256 NKX1-2Q9UD57 310 aaPredicted RBP12.26□□□□□ -0.45
ATG4D-207ENST00000587256 OR14J1Q9UGF5 321 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 ZNF222Q9UK12 451 aa12.26□□□□□ -0.45
ATG4D-207ENST00000587256 DIMT1Q9UNQ2 313 aaKnown RBP12.26□□□□□ -0.45
ATG4D-207ENST00000587256 IGKV1-27A0A075B6S5 117 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 TRBV2A0A0J9YWF9 115 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 A0A1W2PQ09 198 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 SLC1A7O00341 560 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 NOS1APO75052 506 aaPredicted RBP12.25□□□□□ -0.45
ATG4D-207ENST00000587256 INMTO95050 263 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 ZFPL1O95159 310 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 RPSAP08865 295 aaKnown RBP12.25□□□□□ -0.45
ATG4D-207ENST00000587256 ATF1P18846 271 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 PRKACBP22694 351 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 POU3F4P49335 361 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 RBP2P50120 134 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 ETV1P50549 477 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 ARF6P62330 175 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 SLC25A26Q70HW3 274 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 UTS2BQ765I0 119 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 CMTM4Q8IZR5 234 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 ZNRF1Q8ND25 227 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 DNAAF1Q8NEP3 725 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 SPATA3Q8NHX4 192 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 SLAMF9Q96A28 289 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 SPSB1Q96BD6 273 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 CEP19Q96LK0 163 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 TBX15Q96SF7 602 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 PDCD1LG2Q9BQ51 273 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 DCTN5Q9BTE1 182 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 ELL3Q9HB65 397 aaPredicted RBP12.25□□□□□ -0.45
ATG4D-207ENST00000587256 DHDHQ9UQ10 334 aa12.25□□□□□ -0.45
ATG4D-207ENST00000587256 CAB39Q9Y376 341 aaPredicted RBP12.25□□□□□ -0.45
ATG4D-207ENST00000587256 EXOSC1Q9Y3B2 195 aaKnown RBP12.25□□□□□ -0.45
ATG4D-207ENST00000587256 IGKV1-9A0A0C4DH69 117 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 EFCAB10A6NFE3 127 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 RFPL4AA6NLU0 287 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 RFPL4AL1F8VTS6 287 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 H0YHG0 523 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 TRIM77I1YAP6 450 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 CYB5AP00167 134 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 CEBPDP49716 269 aaPredicted RBP12.24□□□□□ -0.45
ATG4D-207ENST00000587256 GTF2A1P52655 376 aaPredicted RBP12.24□□□□□ -0.45
ATG4D-207ENST00000587256 MTCP1P56278 107 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 CAV3P56539 151 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 OR2G6Q5TZ20 316 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 BRD3OSQ6XYD6 125 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 LHFPL2Q6ZUX7 228 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 BCL6BQ8N143 479 aaPredicted RBP12.24□□□□□ -0.45
ATG4D-207ENST00000587256 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.24□□□□□ -0.45
ATG4D-207ENST00000587256 SDSLQ96GA7 329 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 TMEM80Q96HE8 168 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 OPALINQ96PE5 141 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 SIRPDQ9H106 197 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 CNTD2Q9H8S5 307 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 NEK6Q9HC98 313 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 MAB21L2Q9Y586 359 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 KPTNQ9Y664 436 aa12.24□□□□□ -0.45
ATG4D-207ENST00000587256 MMP9P14780 707 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 PRDX2P32119 198 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 ERVK11-1P61568 191 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 ACTG1P63261 375 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 CDK5R1Q15078 307 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 PDCD1Q15116 288 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 CCDC58Q4VC31 144 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 XAF1Q6GPH4 301 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 RPL22L1Q6P5R6 122 aaKnown RBP12.23□□□□□ -0.45
ATG4D-207ENST00000587256 FIP1L1Q6UN15 594 aaKnown RBP12.23□□□□□ -0.45
ATG4D-207ENST00000587256 C9orf139Q6ZV77 190 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 AHSA2Q719I0 299 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 ZNF561Q8N587 486 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 CD177Q8N6Q3 437 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 KIR3DL3Q8N743 410 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 LY6G5BQ8NDX9 201 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 ZFAND2BQ8WV99 257 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
ATG4D-207ENST00000587256 HES4Q9HCC6 221 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 MTCH1Q9NZJ7 389 aa12.23□□□□□ -0.45
ATG4D-207ENST00000587256 TRBV23-1A0A0A0MS06 115 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 XPNPEP2O43895 674 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 KNG1P01042 644 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 HCKP08631 526 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 PIPP12273 146 aaPredicted RBP12.22□□□□□ -0.45
ATG4D-207ENST00000587256 SOX2P48431 317 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 AQP4P55087 323 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 ST3GAL4Q11206 333 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 RUSC1-AS1Q66K80 236 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 VMO1Q7Z5L0 202 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 MKXQ8IYA7 352 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 Q8IYB0 196 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 FAM185AQ8N0U4 392 aa12.22□□□□□ -0.45
ATG4D-207ENST00000587256 STX19Q8N4C7 294 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms