RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CHCHD6Q9BRQ6 235 aa12.24□□□□□ -0.45
SCAMP4-209ENST00000585335 UQCC2Q9BRT2 126 aa12.24□□□□□ -0.45
SCAMP4-209ENST00000585335 ELL3Q9HB65 397 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-209ENST00000585335 MIOXQ9UGB7 285 aa12.24□□□□□ -0.45
SCAMP4-209ENST00000585335 TRAV1-2A0A0B4J238 106 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 IGHV4-61A0A0C4DH41 118 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 SPRY1O43609 319 aaPredicted RBP12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 EGR1P18146 543 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 GADD45AP24522 165 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 PTGFRP43088 359 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 RSU1Q15404 277 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 SFRP4Q6FHJ7 346 aaPredicted RBP12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 ACP7Q6ZNF0 438 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 GPR141Q7Z602 305 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 PXT1Q8NFP0 134 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 CLDND2Q8NHS1 167 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 KCTD7Q96MP8 289 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 OR51E2Q9H255 320 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 TMEM165Q9HC07 324 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 TXNL4BQ9NX01 149 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 NLKQ9UBE8 527 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 GLS2Q9UI32 602 aa12.23□□□□□ -0.45
SCAMP4-209ENST00000585335 IGHV3OR15-7A0A075B7D8 119 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 WNT9BO14905 357 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 SMAD7O15105 426 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 ANGPTL7O43827 346 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 AIREO43918 545 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 ZNF780AO75290 641 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 RPS2P15880 293 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 ZP1P60852 638 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 HNRNPA0Q13151 305 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 GPR176Q14439 515 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 SLC36A1Q7Z2H8 476 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 LRRTM1Q86UE6 522 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 C19orf18Q8NEA5 215 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 OR8B3Q8NGG8 313 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 OR13F1Q8NGS4 319 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 YIPF6Q96EC8 236 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 ZNF488Q96MN9 340 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 OR8B2Q96RD0 313 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 TMEM246Q9BRR3 403 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 DNTTIP1Q9H147 329 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 METTL9Q9H1A3 318 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 WDR13Q9H1Z4 485 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 PPIL3Q9H2H8 161 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 ZNF665Q9H7R5 613 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 MTCH1Q9NZJ7 389 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 ING4Q9UNL4 249 aa12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 MRPS28Q9Y2Q9 187 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-209ENST00000585335 OR2AT4A6NND4 320 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 CEACAM18A8MTB9 384 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 KDM4BO94953 1096 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 KNG1P01042 644 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 IGHV2-5P01817 119 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 GYPAP02724 150 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 CSTBP04080 98 aaKnown RBP12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 UBBP0CG47 229 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 PRKACAP17612 351 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 BCL3P20749 454 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 RPL5P46777 297 aaKnown RBP12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 OR3A4PP47883 348 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 MTNR1BP49286 362 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 ERVK11-1P61568 191 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 AWAT2Q6E213 333 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 TPRA1Q86W33 373 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 FAM58AQ8N1B3 248 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 NEIL1Q96FI4 390 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 MED30Q96HR3 178 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 C18orf12Q96KH6 178 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 COX4I2Q96KJ9 171 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 CNTD2Q9H8S5 307 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 PATZ1Q9HBE1 687 aaKnown RBP12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 PLGRKTQ9HBL7 147 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 HES4Q9HCC6 221 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 GHRLQ9UBU3 117 aa12.21□□□□□ -0.45
SCAMP4-209ENST00000585335 MYO9AB2RTY4 2548 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 A0A096LNT2 108 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 ADAM20O43506 726 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 TFAP2AP05549 437 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 CD99P14209 185 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 ADRA2CP18825 462 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 RAB3BP20337 219 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 HTR2CP28335 458 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 RBMXP38159 391 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 GABRA2P47869 451 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 ALDH3B2P48448 385 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 GZMKP49863 264 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 ESCO2Q56NI9 601 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 SPIN3Q5JUX0 258 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 STUMQ69YW2 141 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 BATF2Q8N1L9 274 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 OR6M1Q8NGM8 313 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 TBC1D15Q8TC07 691 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 FUNDC2Q9BWH2 189 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 RBFOX1Q9NWB1 397 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 IL36GQ9NZH8 169 aa12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 AK6Q9Y3D8 172 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-209ENST00000585335 V9GY05 133 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms