RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 THEM6Q8WUY1 208 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 MCUR1Q96AQ8 359 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 RBM14Q96PK6 669 aaKnown RBP10.11□□□□□ -0.79
SS18-219ENST00000581570 P2RX4Q99571 388 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 ZFP57Q9NU63 452 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 SLC22A13Q9Y226 551 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 SESN1Q9Y6P5 492 aa10.11□□□□□ -0.79
SS18-219ENST00000581570 HUWE1Q7Z6Z7 4374 aaKnown RBP10.11□□□□□ -0.79
SS18-219ENST00000581570 J3QT63 122 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 GSC2O15499 205 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 DNAJC8O75937 253 aaPredicted RBP10.1□□□□□ -0.79
SS18-219ENST00000581570 IFNGP01579 166 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 SEMG1P04279 462 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 AMY1AP04745 511 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 AMY2AP04746 511 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 LYNP07948 512 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 COX4I1P13073 169 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 CHATP28329 748 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 SLC6A1P30531 599 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 GP2P55259 537 aaKnown RBP10.1□□□□□ -0.79
SS18-219ENST00000581570 PSMA6P60900 246 aaKnown RBP10.1□□□□□ -0.79
SS18-219ENST00000581570 RIPPLY1Q0D2K3 151 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 SAMD4BQ5PRF9 694 aaKnown RBP10.1□□□□□ -0.79
SS18-219ENST00000581570 ZBTB49Q6ZSB9 765 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 GDPD3Q7L5L3 318 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 ZNF573Q86YE8 665 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 OR9Q2Q8NGE9 314 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 OR4P4Q8NGL7 312 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 OR4Q3Q8NH05 313 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 NRIP2Q9BQI9 281 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 CLEC7AQ9BXN2 247 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 TMEM133Q9H2Q1 129 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 NIPAL2Q9H841 368 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 MED20Q9H944 212 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 EFCAB1Q9HAE3 211 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 PALMDQ9NP74 551 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 DPM3Q9P2X0 92 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 BAIAP2Q9UQB8 552 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 POLDIP2Q9Y2S7 368 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 DNAH1Q9P2D7 4330 aa10.1□□□□□ -0.79
SS18-219ENST00000581570 hADV38S2A0JD32 116 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 RIIAD1A6NNX1 92 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 NRASP01111 189 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 FABP3P05413 133 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 ATP6V1B1P15313 513 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 ECI1P42126 302 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 LUMP51884 338 aaPredicted RBP10.09□□□□□ -0.79
SS18-219ENST00000581570 ARHGDIBP52566 201 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 RAB25P57735 213 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 CBX1P83916 185 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 MEF2CQ06413 473 aaPredicted RBP10.09□□□□□ -0.79
SS18-219ENST00000581570 ZNF684Q5T5D7 378 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 PLBD1Q6P4A8 553 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 TCF23Q7RTU1 214 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 COMMD2Q86X83 199 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 KLHL30-AS1Q8NEE0 82 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 OR2T33Q8NG76 320 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 OTOSQ8NHW6 89 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 ITFG2Q969R8 447 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 OTULINQ96BN8 352 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 DUX3Q96PT4 197 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 BTBD10Q9BSF8 475 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 ABCD2Q9UBJ2 740 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 DNAH7Q8WXX0 4024 aa10.09□□□□□ -0.79
SS18-219ENST00000581570 A0A0U1RQV5 110 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 FAM183AA6NL82 134 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 HMGB1P1B2RPK0 211 aaPredicted RBP10.08□□□□□ -0.8
SS18-219ENST00000581570 M0QZK8 103 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 ZNF737O75373 536 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 GASTP01350 101 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 H2AFXP16104 143 aaPredicted RBP10.08□□□□□ -0.8
SS18-219ENST00000581570 ZNF3P17036 446 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 OR3A4PP47883 348 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 EDDM3AQ14507 147 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 C9orf66Q5T8R8 295 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 HACD2Q6Y1H2 254 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 TRPM8Q7Z2W7 1104 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 KRTAP17-1Q9BYP8 105 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 MYLK2Q9H1R3 596 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 GORASP2Q9H8Y8 452 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 PAPOLBQ9NRJ5 636 aaKnown RBP10.08□□□□□ -0.8
SS18-219ENST00000581570 ARMC1Q9NVT9 282 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 ENPP5Q9UJA9 477 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 HHLA2Q9UM44 414 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 PIGLQ9Y2B2 252 aa10.08□□□□□ -0.8
SS18-219ENST00000581570 CCL24O00175 119 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 SELENOFO60613 162 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 MMP23AO75900 390 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 KRT36O76013 467 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 SNRNP70P08621 437 aaKnown RBP10.07□□□□□ -0.8
SS18-219ENST00000581570 HMGA2P52926 109 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 PSME3P61289 254 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 SNAPC1Q16533 368 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 LCN1P1Q5VSP4 162 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 CGB2Q6NT52 195 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 ASRGL1Q7L266 308 aa10.07□□□□□ -0.8
SS18-219ENST00000581570 MEPCEQ7L2J0 689 aaKnown RBP10.07□□□□□ -0.8
SS18-219ENST00000581570 KRT77Q7Z794 578 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms