RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 CENPNQ96H22 339 aaPredicted RBP11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 APOL4Q9BPW4 351 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 PRKDCP78527 4128 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 ANKRD61A6NGH8 418 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 METTL15A6NJ78 407 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 C17orf98A8MV24 154 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 GATBO75879 557 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 NXPH2O95156 264 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 TK1P04183 234 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 FUT6P51993 359 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 ERVFRD-1P60508 538 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 MEF2CQ06413 473 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 PLEKHG7Q6ZR37 379 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 IL4I1Q96RQ9 567 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 RBM4BQ9BQ04 359 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 CHST5Q9GZS9 411 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 TNFRSF19Q9NS68 423 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 SLC7A11Q9UPY5 501 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
SMARCE1-216ENST00000580419 SYNGR1O43759 233 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 SERPINA3P01011 423 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 ISG15P05161 165 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 CHRM2P08172 466 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 UBCP0CG48 685 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 GMFBP60983 142 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 LRRC75BQ2VPJ9 315 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 PDLIM3Q53GG5 364 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 FDX2Q6P4F2 183 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 PDZD9Q8IXQ8 264 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 ENTHD1Q8IYW4 607 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 OR51G2Q8NGK0 314 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 RORBQ92753 470 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 TAF15Q92804 592 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 PPP1R14AQ96A00 147 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 MYCBPQ99417 103 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 CIB1Q99828 191 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 RHOFQ9HBH0 211 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 TCF7L1Q9HCS4 588 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 C19orf12Q9NSK7 152 aa11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 TBL2Q9Y4P3 447 aaKnown RBP11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 TET2Q6N021 2002 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-216ENST00000580419 A0A1W2PQL4 384 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 E9PQ18 207 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 SYT7O43581 403 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 MITFO75030 526 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 ZNF737O75373 536 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 DYNLT3P51808 116 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 DLX6P56179 175 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 KRTAP10-3P60369 221 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 KLRD1Q13241 179 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 C2orf68Q2NKX9 166 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 C1orf146Q5VVC0 180 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 UTS2BQ765I0 119 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 BCDIN3DQ7Z5W3 292 aaKnown RBP11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 FAM185AQ8N0U4 392 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 OR11H6Q8NGC7 330 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 FOXRED1Q96CU9 486 aaPredicted RBP11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 CEP19Q96LK0 163 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 SSX3Q99909 188 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 SEMA6AQ9H2E6 1030 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 PLEKHA1Q9HB21 404 aa11.79□□□□□ -0.52
SMARCE1-216ENST00000580419 KCNAB3O43448 404 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 ANGPTL7O43827 346 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 EFNB2P52799 333 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 CAPZA1P52907 286 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 CDC42P60953 191 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 SNRPGP62308 76 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 ACTC1P68032 377 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 ACTA1P68133 377 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 SRSF4Q08170 494 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 ZNF146Q15072 292 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 TMEM244Q5VVB8 128 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 MEDAGQ5VYS4 303 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 SLC35E4Q6ICL7 350 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 ASRGL1Q7L266 308 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 MKXQ8IYA7 352 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 OR8H2Q8N162 312 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 YIPF7Q8N8F6 280 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 CFHR4Q92496 578 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 HRASLS5Q96KN8 279 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 SNX22Q96L94 193 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 ADI1Q9BV57 179 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 GPR173Q9NS66 373 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 KIAA2026Q5HYC2 2103 aa11.78□□□□□ -0.52
SMARCE1-216ENST00000580419 ODF3BA8MYP8 253 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 H3BUX3 64 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 J3QRE1 110 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 ALX3O95076 343 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 MT-ND2P03891 347 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 ZNF728P0DKX0 622 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 ERP29P30040 261 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 GABRA5P31644 462 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 CCR9P51686 369 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 LGALS4P56470 323 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 DEFA6Q01524 100 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 CNN3Q15417 329 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 UBE2V2Q15819 145 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 ZNF626Q68DY1 528 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 SSX6Q7RTT6 188 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms