RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SIGLECL1Q8N7X8 197 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 OR13C3Q8NGS6 347 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 CNIH3Q8TBE1 160 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 H1FXQ92522 213 aaKnown RBP20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 FGGYQ96C11 551 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 NRIP2Q9BQI9 281 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 DCTN5Q9BTE1 182 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 JAM3Q9BX67 310 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 ZNF222Q9UK12 451 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 TRRAPQ9Y4A5 3859 aa20.52■□□□□ 0.87
CDC42EP4-205ENST00000580315 CCDC159P0C7I6 412 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 OCM2P0CE71 109 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 OCMP0CE72 109 aaPredicted RBP20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 HKR1P10072 659 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 SELLP14151 372 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 NDUFB7P17568 137 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 CAV3P56539 151 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 ARF6P62330 175 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 PDCD1Q15116 288 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 TUSC1Q2TAM9 212 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 SHISA2Q6UWI4 295 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 UTS2BQ765I0 119 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 CALHM1Q8IU99 346 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 CMTM4Q8IZR5 234 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 BCL6BQ8N143 479 aaPredicted RBP20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 LY6G5BQ8NDX9 201 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 DNAAF1Q8NEP3 725 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 ADAT3Q96EY9 351 aaPredicted RBP20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 SDSLQ96GA7 329 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 ZNF649Q9BS31 505 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 COMMD4Q9H0A8 199 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 ONECUT1Q9UBC0 465 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 KPTNQ9Y664 436 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 HSPE1-MOB4S4R3N1 261 aa20.51■□□□□ 0.87
CDC42EP4-205ENST00000580315 H0YAE9 185 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 TFF1P04155 84 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 SFTPBP07988 381 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 MMP9P14780 707 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 PRKACBP22694 351 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 CAPGP40121 348 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 RBP2P50120 134 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 ATP1B3P54709 279 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 TMEM185AQ8NFB2 350 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 TBX15Q96SF7 602 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 SIRPDQ9H106 197 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 ZNF696Q9H7X3 374 aa20.5■□□□□ 0.87
CDC42EP4-205ENST00000580315 RFPL4AA6NLU0 287 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 TMEM212A6NML5 194 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 RFPL4AL1F8VTS6 287 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 SLC1A7O00341 560 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 LIMS3P0CW19 117 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 LIMS4P0CW20 117 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 ATF1P18846 271 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 CAPZA1P52907 286 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 MED21Q13503 144 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 TMPRSS11AQ6ZMR5 421 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 C8orf59Q8N0T1 100 aaPredicted RBP20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 OR5AK2Q8NH90 309 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 C8orf46Q8TAG6 207 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 NEK6Q9HC98 313 aa20.49■□□□□ 0.87
CDC42EP4-205ENST00000580315 CYB5AP00167 134 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 MYL12AP19105 171 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 PRTN3P24158 256 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 PRDX2P32119 198 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 ZNF561Q8N587 486 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 KIR3DL3Q8N743 410 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 ZNRF1Q8ND25 227 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 OR51A4Q8NGJ6 313 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 OR10AC1Q8NH08 325 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 SPSB1Q96BD6 273 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 CEP19Q96LK0 163 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 HES4Q9HCC6 221 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 CHCHD3Q9NX63 227 aaKnown RBP20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 CAB39Q9Y376 341 aaPredicted RBP20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 EXOSC1Q9Y3B2 195 aaKnown RBP20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 MAB21L2Q9Y586 359 aa20.48■□□□□ 0.87
CDC42EP4-205ENST00000580315 IGKV1-27A0A075B6S5 117 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 E9PI62 339 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 ZFPL1O95159 310 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 AZGP1P25311 298 aaKnown RBP20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 MTCP1P56278 107 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 ERVK11-1P61568 191 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 BAMBIQ13145 260 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 BRD3OSQ6XYD6 125 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 LHFPL2Q6ZUX7 228 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 SLC25A26Q70HW3 274 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 BATF2Q8N1L9 274 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 CD177Q8N6Q3 437 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 GATAD2BQ8WXI9 593 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 DUX5Q96PT3 197 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 ZMAT3Q9HA38 289 aaKnown RBP20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 OR14J1Q9UGF5 321 aa20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 DIMT1Q9UNQ2 313 aaKnown RBP20.47■□□□□ 0.87
CDC42EP4-205ENST00000580315 TRBV23-1A0A0A0MS06 115 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 TRBV2A0A0J9YWF9 115 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 A0A1W2PQ09 198 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 KNG1P01042 644 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 ETV1P50549 477 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 SLC34A1Q06495 639 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 CCDC58Q4VC31 144 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms