RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 TFF1P04155 84 aa16■□□□□ 0.15
SS18-208ENST00000577751 ATP1B3P54709 279 aa16■□□□□ 0.15
SS18-208ENST00000577751 IL13RA1P78552 427 aa16■□□□□ 0.15
SS18-208ENST00000577751 DGUOKQ16854 277 aa16■□□□□ 0.15
SS18-208ENST00000577751 SMIM21Q3B7S5 101 aa16■□□□□ 0.15
SS18-208ENST00000577751 KLF17Q5JT82 389 aaPredicted RBP16■□□□□ 0.15
SS18-208ENST00000577751 DMKNQ6E0U4 476 aaPredicted RBP16■□□□□ 0.15
SS18-208ENST00000577751 IZUMO2Q6UXV1 221 aa16■□□□□ 0.15
SS18-208ENST00000577751 LHFPL2Q6ZUX7 228 aa16■□□□□ 0.15
SS18-208ENST00000577751 BTN2A1Q7KYR7 527 aa16■□□□□ 0.15
SS18-208ENST00000577751 SERPINA12Q8IW75 414 aa16■□□□□ 0.15
SS18-208ENST00000577751 STX19Q8N4C7 294 aa16■□□□□ 0.15
SS18-208ENST00000577751 ST8SIA4Q92187 359 aa16■□□□□ 0.15
SS18-208ENST00000577751 UPRTQ96BW1 309 aa16■□□□□ 0.15
SS18-208ENST00000577751 SMIM19Q96E16 107 aa16■□□□□ 0.15
SS18-208ENST00000577751 SDSLQ96GA7 329 aa16■□□□□ 0.15
SS18-208ENST00000577751 ZCCHC4Q9H5U6 513 aa16■□□□□ 0.15
SS18-208ENST00000577751 MTCH1Q9NZJ7 389 aa16■□□□□ 0.15
SS18-208ENST00000577751 MAB21L2Q9Y586 359 aa16■□□□□ 0.15
SS18-208ENST00000577751 NKX6-3A6NJ46 265 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 SLC1A7O00341 560 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 CDK1P06493 297 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 SELLP14151 372 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 EPHA1P21709 976 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 HSPA13P48723 471 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 SCGB2A2Q13296 93 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 IKZF1Q13422 519 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 LRRC10Q5BKY1 277 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 RNLSQ5VYX0 342 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 ZNF529Q6P280 563 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 CD177Q8N6Q3 437 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 NANOGP1Q8N7R0 232 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 LY6G5BQ8NDX9 201 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 OR5D14Q8NGL3 314 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 OR13C9Q8NGT0 318 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 DMRTB1Q96MA1 342 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 OPALINQ96PE5 141 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 RPUSD1Q9UJJ7 312 aaKnown RBP15.99■□□□□ 0.15
SS18-208ENST00000577751 DHDHQ9UQ10 334 aa15.99■□□□□ 0.15
SS18-208ENST00000577751 RFPL4AA6NLU0 287 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 RFPL4AL1F8VTS6 287 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 F8VVB4 439 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 F8VWA3 439 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 NXPH2O95156 264 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 GABRA2P47869 451 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 MTCP1P56278 107 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 CAV3P56539 151 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 WNT4P56705 351 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 TUSC1Q2TAM9 212 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 CRIP3Q6Q6R5 217 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 SLC25A26Q70HW3 274 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 PNLDC1Q8NA58 520 aaKnown RBP15.98■□□□□ 0.15
SS18-208ENST00000577751 GPR148Q8TDV2 347 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 TSEN15Q8WW01 171 aaKnown RBP15.98■□□□□ 0.15
SS18-208ENST00000577751 CEP19Q96LK0 163 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 ZNF281Q9Y2X9 895 aa15.98■□□□□ 0.15
SS18-208ENST00000577751 ZNF879B4DU55 563 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 KNG1P01042 644 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 PRDX2P32119 198 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 FGF12P61328 243 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 SLC35A2P78381 396 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 DOC2BQ14184 412 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 ARMCX4Q5H9R4 360 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 ASPHD2Q6ICH7 369 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 RNF144BQ7Z419 303 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 BATF2Q8N1L9 274 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 ZNRF1Q8ND25 227 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 C8orf46Q8TAG6 207 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 GHSRQ92847 366 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 SLAMF9Q96A28 289 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 PGLYRP3Q96LB9 341 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 DCTN5Q9BTE1 182 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 CDCA4Q9BXL8 241 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 PAK1IP1Q9NWT1 392 aaPredicted RBP15.97■□□□□ 0.15
SS18-208ENST00000577751 SCN3BQ9NY72 215 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 SLC25A10Q9UBX3 287 aaPredicted RBP15.97■□□□□ 0.15
SS18-208ENST00000577751 NUP50Q9UKX7 468 aa15.97■□□□□ 0.15
SS18-208ENST00000577751 PTGES3LE9PB15 166 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 SULT1B1O43704 296 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 PLATP00750 562 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 MMP9P14780 707 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 TAS2R43P59537 309 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 RPS11P62280 158 aaKnown RBP eCLIP15.96■□□□□ 0.15
SS18-208ENST00000577751 PDZK1IP1Q13113 114 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 MKXQ8IYA7 352 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 ZNF561Q8N587 486 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 MYDGFQ969H8 173 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 SIRPDQ9H106 197 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 DUSP21Q9H596 190 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 CNTD2Q9H8S5 307 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 NEK6Q9HC98 313 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 ERGIC3Q9Y282 383 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 PCDHGB5Q9Y5G0 923 aa15.96■□□□□ 0.15
SS18-208ENST00000577751 TRBV5-5A0A0J9YX44 114 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 MYL12BO14950 172 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 TCF21O43680 179 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 CD1AP06126 327 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 CD2P06729 351 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 OCM2P0CE71 109 aa15.95■□□□□ 0.14
SS18-208ENST00000577751 OCMP0CE72 109 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms