RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ECI1P42126 302 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 OR8U1Q8NH10 309 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 DUSP13Q9UII6 198 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 DEGS1O15121 323 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 EIF3GO75821 320 aaKnown RBP eCLIP15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 DFFBO76075 338 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 SSTP61278 116 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 OVCH2Q7RTZ1 564 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 MVB12AQ96EY5 273 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 GPHA2Q96T91 129 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 LIPGQ9Y5X9 500 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 R4GN57 208 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 ZNF831Q5JPB2 1677 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 PDGFBP01127 241 aaPredicted RBP15.83■□□□□ 0.13
ATPAF1-214ENST00000576409 RPS2P15880 293 aaKnown RBP15.83■□□□□ 0.13
ATPAF1-214ENST00000576409 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.83■□□□□ 0.13
ATPAF1-214ENST00000576409 ANKUB1A6NFN9 424 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 PSMB3P49720 205 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 SCAND1P57086 179 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 UBE2G2P60604 165 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 TRIM61Q5EBN2 209 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 STRADBQ9C0K7 418 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 SLC35B3Q9H1N7 401 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 A0A1W2PQF6 199 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 TMEM267Q0VDI3 215 aaPredicted RBP15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 PNLIPRP3Q17RR3 467 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 PLXNA1Q9UIW2 1896 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 MED13LQ71F56 2210 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 FIGNL2A6NMB9 653 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 ZNF814B7Z6K7 855 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 ADAM20O43506 726 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 GAS1P54826 345 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 DEGS2Q6QHC5 323 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 EXTL1Q92935 676 aa15.83■□□□□ 0.12
ATPAF1-214ENST00000576409 TNFSF14O43557 240 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 HPP00738 406 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 FAM157BP0CG42 384 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 RPS11P62280 158 aaKnown RBP eCLIP15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 KIAA2026Q5HYC2 2103 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 BAGE3Q86Y29 109 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 BAGE2Q86Y30 109 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 GNPNAT1Q96EK6 184 aaPredicted RBP15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 NRIP2Q9BQI9 281 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 PLEKHF2Q9H8W4 249 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 STRAPQ9Y3F4 350 aaKnown RBP15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 PHF3Q92576 2039 aaKnown RBP15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 TRAV39A0A0B4J263 110 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 KIR2DS1A0A191URI9 304 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 KRASP01116 189 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 TTRP02766 147 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 KIR2DS4P43632 304 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 GPM6AP51674 278 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 KIR2DS1Q14954 304 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 NAT6Q93015 286 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 ASAH2BP0C7U1 165 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 PTGER4P35408 488 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 HYAL1Q12794 435 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 SPACA9Q96E40 222 aaPredicted RBP15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 SOSTQ9BQB4 213 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 RPH3ALQ9UNE2 315 aa15.82■□□□□ 0.12
ATPAF1-214ENST00000576409 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 OR2A4O95047 310 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 YIF1AO95070 293 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 VAMP5O95183 116 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 BGLAPP02818 100 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 ACKR3P25106 362 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 KCNIP4Q6PIL6 250 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 OR2C3Q8N628 320 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 PP6455Q8WZ26 134 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 OR2A7Q96R45 310 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 DUSP23Q9BVJ7 150 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 ZNF576Q9H609 170 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 TIMM10BQ9Y5J6 103 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 METTL15P1P0C7V9 234 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 DRAM2Q6UX65 266 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 MASP2O00187 686 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 ZNF32P17041 273 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 EDDM3BP56851 147 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 SELENOVP59797 346 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 NHLH2Q02577 135 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 FZD5Q13467 585 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 WIPI1Q5MNZ9 446 aaPredicted RBP15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 C9orf40Q8IXQ3 194 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 KCNMB2Q9Y691 235 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 PKDREJQ9NTG1 2253 aa15.81■□□□□ 0.12
ATPAF1-214ENST00000576409 IGKV1D-42A0A075B6H8 117 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 CCDC187A0A096LP49 1063 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 TRBV23-1A0A0A0MS06 115 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 TGFBR3Q03167 851 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 RAB31Q13636 194 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 UNQ9370/PRO34162Q6UXP9 181 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 RPS4Y2Q8TD47 263 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 TM4SF19Q96DZ7 209 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 YBX2Q9Y2T7 364 aaKnown RBP15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 TRBV5-5A0A0J9YX44 114 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 C2CD4DB7Z1M9 353 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 GLB1P16278 677 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 G0S2P27469 103 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 GGTLC2Q14390 218 aa15.8■□□□□ 0.12
ATPAF1-214ENST00000576409 ZNF610Q8N9Z0 462 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms