RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 VCX2Q9H322 139 aa5.09□□□□□ -1.59
CACNA1A-203ENST00000573891 TMEM27Q9HBJ8 222 aa5.09□□□□□ -1.59
CACNA1A-203ENST00000573891 CDH20Q9HBT6 801 aa5.09□□□□□ -1.59
CACNA1A-203ENST00000573891 NIT2Q9NQR4 276 aa5.09□□□□□ -1.59
CACNA1A-203ENST00000573891 SLC22A13Q9Y226 551 aa5.09□□□□□ -1.59
CACNA1A-203ENST00000573891 KCNIP3Q9Y2W7 256 aa5.09□□□□□ -1.59
CACNA1A-203ENST00000573891 ARHGAP32A7KAX9 2087 aa5.09□□□□□ -1.59
CACNA1A-203ENST00000573891 A0A0G2JK05 382 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 A0A1W2PPV4 95 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 PRORSD1PA6NEY8 169 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 C5orf58C9J3I9 102 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 C11orf98E9PRG8 122 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 CLDN34H7C241 214 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 RGS16O15492 202 aaPredicted RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 ARPC5O15511 151 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 FOXH1O75593 365 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SCO1O75880 301 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 CH25HO95992 272 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 IGHV1-46P01743 117 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 CD1AP06126 327 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 RNASE1P07998 156 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 ADH4P08319 380 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 MMP7P09237 267 aaPredicted RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SCGB1A1P11684 91 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 MAKP20794 623 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 ZFP36P26651 326 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 ATP4BP51164 291 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 MMP15P51511 669 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 AKR1D1P51857 326 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 POLR2JP52435 117 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 CDC42P60953 191 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 MAGOHP61326 146 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 RAP1AP62834 184 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 LCN2P80188 198 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 CDK6Q00534 326 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 ZNF74Q16587 644 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 HIST3H3Q16695 136 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 TBC1D28Q2M2D7 210 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SLC36A2Q495M3 483 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 TMEM255AQ5JRV8 349 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 KLF17Q5JT82 389 aaPredicted RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 LRIF1Q5T3J3 769 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 GCNT6Q5T4J0 391 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 RNLSQ5VYX0 342 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 REEP3Q6NUK4 255 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 MAVSQ7Z434 540 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 RANBP3LQ86VV4 465 aaPredicted RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 KLBQ86Z14 1044 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 TGIF2LXQ8IUE1 241 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 MSRB3Q8IXL7 192 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 ZNF101Q8IZC7 436 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 FITM2Q8N6M3 262 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 CCDC71LQ8N9Z2 235 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 BHLHE22Q8NFJ8 381 aaPredicted RBP5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 OR4K5Q8NGD3 323 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 OR5M8Q8NGP6 311 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 OR1J2Q8NGS2 313 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 STOML3Q8TAV4 291 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 NEK7Q8TDX7 302 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 CCL17Q92583 94 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SNAPC3Q92966 411 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 RNFT2Q96EX2 444 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 DUX5Q96PT3 197 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 OR52B2Q96RD2 323 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 PFDN5Q99471 154 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SEPHS2Q99611 448 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 GPA33Q99795 319 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 PKP2Q99959 881 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SLC30A2Q9BRI3 323 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 PDCD10Q9BUL8 212 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SPATA5L1Q9BVQ7 753 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 C1QTNF5Q9BXJ0 243 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 MUC13Q9H3R2 512 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 Q9H521 79 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 TMEM38AQ9H6F2 299 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SLCO1B3Q9NPD5 702 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 AKIP1Q9NQ31 210 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 MMP26Q9NRE1 261 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 ZFP57Q9NU63 452 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 VNN3Q9NY84 501 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 TAS2R5Q9NYW4 299 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 SLC25A37Q9NYZ2 338 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 NDUFAF4Q9P032 175 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 ADAM18Q9Y3Q7 739 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 AP4S1Q9Y587 144 aa5.08□□□□□ -1.6
CACNA1A-203ENST00000573891 TRBV5-3A0A0A0MS03 114 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 TRAV25A0A0B4J276 109 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 IQCMA0A1B0GVH7 501 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 MEIOCA2RUB1 952 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 METTL21EPA6NDL7 271 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 A8MXK9 166 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 H7C2Y5 167 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 DNASE2O00115 360 aaPredicted RBP5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 SLC33A1O00400 549 aaPredicted RBP5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 UBDO15205 165 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 SPRY3O43610 288 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 OR6A2O95222 327 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 LYPD3O95274 346 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 SERPINA3P01011 423 aa5.07□□□□□ -1.6
CACNA1A-203ENST00000573891 IGHG1P01857 330 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms