RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RPS11P62280 158 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHD3-215ENST00000572750 MED22Q15528 200 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 DCAF12L2Q5VW00 463 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 WDR25Q64LD2 544 aaPredicted RBP13.15□□□□□ -0.3
CHD3-215ENST00000572750 FAHD2BQ6P2I3 314 aaPredicted RBP13.15□□□□□ -0.3
CHD3-215ENST00000572750 ZNF841Q6ZN19 808 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 LHFPL2Q6ZUX7 228 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 SERPINA12Q8IW75 414 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 FGFRL1Q8N441 504 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 DNAAF1Q8NEP3 725 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 OR4M2Q8NGB6 313 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 OR51A2Q8NGJ7 313 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 OR5D18Q8NGL1 313 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 TMIGD2Q96BF3 282 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 C12orf43Q96C57 262 aaKnown RBP13.15□□□□□ -0.3
CHD3-215ENST00000572750 ORAI1Q96D31 301 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 FAHD2AQ96GK7 314 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 NRIP2Q9BQI9 281 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 SHARPINQ9H0F6 387 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 RASSF4Q9H2L5 321 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 DOCK11Q5JSL3 2073 aa13.15□□□□□ -0.3
CHD3-215ENST00000572750 TRBV5-5A0A0J9YX44 114 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 NKX6-3A6NJ46 265 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 TRAPPC2LH3BP13 241 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 DENRO43583 198 aaKnown RBP13.14□□□□□ -0.31
CHD3-215ENST00000572750 NDUFA2O43678 99 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 NXPH2O95156 264 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 CD2P06729 351 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 AMY2BP19961 511 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 MAP2K4P45985 399 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 ATP1B3P54709 279 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 MTCP1P56278 107 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 IL24Q13007 206 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 IKZF1Q13422 519 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 SPHARQ15513 63 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 SMIM21Q3B7S5 101 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 CHRFAM7AQ494W8 412 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 YIF1BQ5BJH7 314 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 ACP7Q6ZNF0 438 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 PRSS48Q7RTY5 328 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 OR14A2Q96R54 314 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 CDC42EP3Q9UKI2 254 aa13.14□□□□□ -0.31
CHD3-215ENST00000572750 IGKV1D-17A0A075B6S4 117 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 OR2AT4A6NND4 320 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 C22orf46C9J442 243 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 F8VVB4 439 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 F8VWA3 439 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 DVL1O14640 695 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 SPRY1O43609 319 aaPredicted RBP13.13□□□□□ -0.31
CHD3-215ENST00000572750 RAB3AP20336 220 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 HNF1AP20823 631 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 PCMT1P22061 227 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 CPT2P23786 658 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 CEBPDP49716 269 aaPredicted RBP13.13□□□□□ -0.31
CHD3-215ENST00000572750 BDH1Q02338 343 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 ACSM1Q08AH1 577 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 Q499Y3 187 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 CRIP3Q6Q6R5 217 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 OR5D14Q8NGL3 314 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 ANGPTL6Q8NI99 470 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 ST8SIA4Q92187 359 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 CEP19Q96LK0 163 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 GAFA1Q96PS6 74 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 NKX3-1Q99801 234 aaPredicted RBP13.13□□□□□ -0.31
CHD3-215ENST00000572750 BEX2Q9BXY8 128 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 TMPRSS13Q9BYE2 586 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 HES4Q9HCC6 221 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 KAAG1Q9UBP8 84 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 ZNF222Q9UK12 451 aa13.13□□□□□ -0.31
CHD3-215ENST00000572750 POLR3KQ9Y2Y1 108 aaPredicted RBP13.13□□□□□ -0.31
CHD3-215ENST00000572750 PKD1L1Q8TDX9 2849 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 IGHV2-70DA0A0C4DH43 119 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 ANGPTL7O43827 346 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 NOS1APO75052 506 aaPredicted RBP13.12□□□□□ -0.31
CHD3-215ENST00000572750 AVPP01185 164 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 HSMCR30P0CW71 290 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 PSG2P11465 335 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 GABRA2P47869 451 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 GABARAPL2P60520 117 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 PAX2Q02962 417 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 ZNF529Q6P280 563 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 SLC36A1Q7Z2H8 476 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 TMED9Q9BVK6 235 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
CHD3-215ENST00000572750 RASL12Q9NYN1 266 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 LPAR3Q9UBY5 353 aa13.12□□□□□ -0.31
CHD3-215ENST00000572750 TRAV8-7A0A075B6U6 113 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 PPIAL4CA0A0B4J2A2 164 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 ADRA2CP18825 462 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 BCL3P20749 454 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 NPBWR2P48146 333 aa13.11□□□□□ -0.31
CHD3-215ENST00000572750 NPY4RP50391 375 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms