RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 RNF167Q9H6Y7 350 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 TAS2R4Q9NYW5 299 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 MRPL15Q9P015 296 aaKnown RBP12.62□□□□□ -0.39
RAB40B-203ENST00000570676 CKLFQ9UBR5 152 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 INSIG2Q9Y5U4 225 aa12.62□□□□□ -0.39
RAB40B-203ENST00000570676 TRAV8-7A0A075B6U6 113 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 ZNF850A8MQ14 1090 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 PTBP3O95758 552 aaKnown RBP12.61□□□□□ -0.39
RAB40B-203ENST00000570676 CST4P01036 141 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 WNT2P09544 360 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 MYL9P24844 172 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 VBP1P61758 197 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 PRDX4Q13162 271 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 CTF1Q16619 201 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 ZNF404Q494X3 552 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 KLF17Q5JT82 389 aaPredicted RBP12.61□□□□□ -0.39
RAB40B-203ENST00000570676 PRAMEF6Q5VXH4 476 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 OR13C9Q8NGT0 318 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 KCTD7Q96MP8 289 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 TMEM246Q9BRR3 403 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 SUCNR1Q9BXA5 334 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 CHST5Q9GZS9 411 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 RBM38Q9H0Z9 239 aaKnown RBP12.61□□□□□ -0.39
RAB40B-203ENST00000570676 ZCCHC4Q9H5U6 513 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 TCF7L1Q9HCS4 588 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 ESM1Q9NQ30 184 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 BATF3Q9NR55 127 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 GPR173Q9NS66 373 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 NDUFA13Q9P0J0 144 aa12.61□□□□□ -0.39
RAB40B-203ENST00000570676 GMDSO60547 372 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 NRASP01111 189 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 RPS2P15880 293 aaKnown RBP12.6□□□□□ -0.39
RAB40B-203ENST00000570676 IGFBP3P17936 291 aaPredicted RBP12.6□□□□□ -0.39
RAB40B-203ENST00000570676 SRMP19623 302 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 FSTP19883 344 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 CA6P23280 308 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 TGFBR1P36897 503 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 NCS1P62166 190 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 PPP3R1P63098 170 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 HOXA4Q00056 320 aaPredicted RBP12.6□□□□□ -0.39
RAB40B-203ENST00000570676 MPPED2Q15777 294 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 TMEM42Q69YG0 159 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 ASPHD2Q6ICH7 369 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 MOB3CQ70IA8 216 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 UTS2BQ765I0 119 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 KRT74Q7RTS7 529 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 ZDHHC23Q8IYP9 409 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 C1orf87Q8N0U7 546 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 BPIFB2Q8N4F0 458 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 ZDHHC22Q8N966 263 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 OR1M1Q8NGA1 313 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 ERGIC1Q969X5 290 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 ISOC1Q96CN7 298 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 BCL7BQ9BQE9 202 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 ADAT1Q9BUB4 502 aaKnown RBP12.6□□□□□ -0.39
RAB40B-203ENST00000570676 SSBP3Q9BWW4 388 aaPredicted RBP12.6□□□□□ -0.39
RAB40B-203ENST00000570676 SLITRK2Q9H156 845 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 PPP1R3EQ9H7J1 279 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 OR5V1Q9UGF6 321 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 FOXJ3Q9UPW0 622 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 MPC1Q9Y5U8 109 aa12.6□□□□□ -0.39
RAB40B-203ENST00000570676 TRAV1-2A0A0B4J238 106 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 A6NHS1 94 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 LRRC30A6NM36 301 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 SULT1B1O43704 296 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 OCMP0CE72 109 aaPredicted RBP12.59□□□□□ -0.39
RAB40B-203ENST00000570676 ATF1P18846 271 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 RAB3AP20336 220 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 CPT2P23786 658 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 OR8G1Q15617 311 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 UBE2V2Q15819 145 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 DMRTC1Q5HYR2 192 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 CEP78Q5JTW2 689 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 PLCXD3Q63HM9 321 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 FAM216AQ8WUB2 273 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 C22orf15Q8WYQ4 148 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 NEIL1Q96FI4 390 aaPredicted RBP12.59□□□□□ -0.39
RAB40B-203ENST00000570676 HIST1H2AAQ96QV6 131 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 SLC22A4Q9H015 551 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 ABCB9Q9NP78 766 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 SNTG1Q9NSN8 517 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 UFSP2Q9NUQ7 469 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 MIOXQ9UGB7 285 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 RSL24D1Q9UHA3 163 aaKnown RBP12.59□□□□□ -0.39
RAB40B-203ENST00000570676 PPIAL4AQ9Y536 164 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 AUP1Q9Y679 476 aa12.59□□□□□ -0.39
RAB40B-203ENST00000570676 IGHV2-70DA0A0C4DH43 119 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 IGKV1-9A0A0C4DH69 117 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 SHISA3A0PJX4 238 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 ANXA2P2A6NMY6 339 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 H3BMQ9 156 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 TRIM77I1YAP6 450 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 HAX1O00165 279 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 MAS1P04201 325 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 MTNR1BP49286 362 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 PAX8Q06710 450 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 CNN3Q15417 329 aaKnown RBP12.58□□□□□ -0.4
RAB40B-203ENST00000570676 ZNF529Q6P280 563 aa12.58□□□□□ -0.4
RAB40B-203ENST00000570676 LYPD2Q6UXB3 125 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms