RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 IRGMA1A4Y4 181 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 RFPL4AA6NLU0 287 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 TMEM212A6NML5 194 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 E9PI62 339 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 RFPL4AL1F8VTS6 287 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 J3QLW9 94 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 M0R1W7 72 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 OGG1O15527 345 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 ZNF737O75373 536 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 ZFPL1O95159 310 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SERPINA3P01011 423 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 KNG1P01042 644 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SFTPBP07988 381 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 RNASE1P07998 156 aaKnown RBP6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 CCDC159P0C7I6 412 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 PIPP12273 146 aaPredicted RBP6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SELLP14151 372 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 ZNF19P17023 458 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 PRKACBP22694 351 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 PRTN3P24158 256 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 PEX2P28328 305 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 PRDX2P32119 198 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 ARF6P62330 175 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 UBA52P62987 128 aaKnown RBP6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 GABPB1Q06547 395 aaPredicted RBP6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 ZNF146Q15072 292 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SMN1Q16637 294 aaKnown RBP6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SMIM21Q3B7S5 101 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 METTL11BQ5VVY1 283 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 Q6YL49 198 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 ANGPTL5Q86XS5 388 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SAXO1Q8IYX7 474 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 TMEM86BQ8N661 226 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SIGLECL1Q8N7X8 197 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 ZNRF1Q8ND25 227 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SETD9Q8NE22 299 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 Q8NFD4 153 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 OR51A4Q8NGJ6 313 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 OR10AC1Q8NH08 325 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 TFAP2CQ92754 450 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SPSB1Q96BD6 273 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 FGGYQ96C11 551 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 MS4A7Q9GZW8 240 aaPredicted RBP6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 RHOFQ9HBH0 211 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 NOX4Q9NPH5 578 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 SNTG1Q9NSN8 517 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 FKBP14Q9NWM8 211 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 DNAJB11Q9UBS4 358 aa6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 DIMT1Q9UNQ2 313 aaKnown RBP6.73□□□□□ -1.33
HDGFL3-205ENST00000568129 TRAV40A0A0B4J280 105 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 IGHV1-69DA0A0B4J2H0 117 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 NKX6-3A6NJ46 265 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 F8VVB4 439 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 F8VWA3 439 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 K7N7A8 449 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 CLIC3O95833 236 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 IGHV1-69P01742 117 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 LMO1P25800 156 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 CAPGP40121 348 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 RBP2P50120 134 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 ETV1P50549 477 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 GBX2P52951 348 aaPredicted RBP6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 ATP1B3P54709 279 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 PDZK1IP1Q13113 114 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 CNN3Q15417 329 aaKnown RBP6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 SLC9A3R2Q15599 337 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 LRRC36Q1X8D7 754 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 ODF4Q2M2E3 257 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 GPR157Q5UAW9 335 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 RNLSQ5VYX0 342 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 ASPHD2Q6ICH7 369 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 HCP5Q6MZN7 132 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 RPL22L1Q6P5R6 122 aaKnown RBP6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 LHFPL2Q6ZUX7 228 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 SERPINA12Q8IW75 414 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 MKXQ8IYA7 352 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 Q8IYB0 196 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 CNIH3Q8TBE1 160 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 TBC1D15Q8TC07 691 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 CYGBQ8WWM9 190 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 C22orf15Q8WYQ4 148 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 ST8SIA4Q92187 359 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 GGHQ92820 318 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 CEP19Q96LK0 163 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 ZNF488Q96MN9 340 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 ZCCHC4Q9H5U6 513 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 PLEKHA1Q9HB21 404 aa6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 CNOT2Q9NZN8 540 aaKnown RBP6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 NKX1-2Q9UD57 310 aaPredicted RBP6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 EXOSC1Q9Y3B2 195 aaKnown RBP6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 SOX21Q9Y651 276 aaPredicted RBP6.72□□□□□ -1.33
HDGFL3-205ENST00000568129 TENM1Q9UKZ4 2725 aa6.71□□□□□ -1.33
HDGFL3-205ENST00000568129 TRBV2A0A0J9YWF9 115 aa6.71□□□□□ -1.34
HDGFL3-205ENST00000568129 FAM230AA0A1W2PPH8 454 aa6.71□□□□□ -1.34
HDGFL3-205ENST00000568129 DNAJC9-AS1A6NH13 148 aa6.71□□□□□ -1.34
HDGFL3-205ENST00000568129 RNASEK-C17orf49H0YIS7 233 aa6.71□□□□□ -1.34
HDGFL3-205ENST00000568129 GPX5O75715 221 aa6.71□□□□□ -1.34
HDGFL3-205ENST00000568129 KDM4BO94953 1096 aa6.71□□□□□ -1.34
HDGFL3-205ENST00000568129 NXPH2O95156 264 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms