RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 LYZL4Q96KX0 146 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 CEP19Q96LK0 163 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 UQCC2Q9BRT2 126 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 SMURF1Q9HCE7 757 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 GCM1Q9NP62 436 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 HMG20AQ9NP66 347 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 ABCB9Q9NP78 766 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 TAS2R4Q9NYW5 299 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 PCDHB10Q9UN67 800 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 ARHGAP32A7KAX9 2087 aa11.31□□□□□ -0.6
CLK3-218ENST00000566926 TRAV8-7A0A075B6U6 113 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 A0A0G2JK05 382 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 ZNF816-ZNF321PA0A0X1KG74 233 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 ANKRD30BLA7E2S9 258 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 FAM157AC9JC47 383 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 F5H5P2 479 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 H0YL77 283 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 TMEM178BH3BS89 294 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 IGHV2-5P01817 119 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 CLEC2LP0C7M8 214 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 OCMP0CE72 109 aaPredicted RBP11.3□□□□□ -0.6
CLK3-218ENST00000566926 CALCBP10092 127 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 CD37P11049 281 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 CA6P23280 308 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 CPT2P23786 658 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 BDKRB2P30411 391 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 CD200P41217 278 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 GATA4P43694 442 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 GSK3AP49840 483 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 BTG1P62324 171 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 FAM3AP98173 230 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 CNN3Q15417 329 aaKnown RBP11.3□□□□□ -0.6
CLK3-218ENST00000566926 CR1LQ2VPA4 569 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 IDNKQ5T6J7 187 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 TEX29Q8N6K0 151 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 OR11L1Q8NGX0 322 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 TMEM186Q96B77 213 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 ADAT3Q96EY9 351 aaPredicted RBP11.3□□□□□ -0.6
CLK3-218ENST00000566926 WDFY2Q96P53 400 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 ADAT1Q9BUB4 502 aaKnown RBP11.3□□□□□ -0.6
CLK3-218ENST00000566926 WDR12Q9GZL7 423 aaKnown RBP11.3□□□□□ -0.6
CLK3-218ENST00000566926 PIGLQ9Y2B2 252 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 AK6Q9Y3D8 172 aaKnown RBP11.3□□□□□ -0.6
CLK3-218ENST00000566926 ETV7Q9Y603 341 aa11.3□□□□□ -0.6
CLK3-218ENST00000566926 SLC17A2O00624 439 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 FSTL3O95633 263 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 IGHV2-70P01814 119 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 MAS1P04201 325 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 SRD5A1P18405 259 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 PRKACBP22694 351 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 MDH2P40926 338 aaKnown RBP11.29□□□□□ -0.6
CLK3-218ENST00000566926 ETV6P41212 452 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 BMXP51813 675 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 PRSS12P56730 875 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 OR10A3P58181 314 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 ZNF45Q02386 682 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 SPANXN2Q5MJ10 180 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 CLVS2Q5SYC1 327 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 TMEM42Q69YG0 159 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 MOGAT3Q86VF5 341 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 LRRC28Q86X40 367 aaPredicted RBP11.29□□□□□ -0.6
CLK3-218ENST00000566926 OR56B2PQ8NGI1 322 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 OR6M1Q8NGM8 313 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 ZNF671Q8TAW3 534 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 METTL17Q9H7H0 456 aaPredicted RBP11.29□□□□□ -0.6
CLK3-218ENST00000566926 FN3KRPQ9HA64 309 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 PLGRKTQ9HBL7 147 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 C14orf119Q9NWQ9 140 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 HIF1ANQ9NWT6 349 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 RABL2AQ9UBK7 228 aaPredicted RBP11.29□□□□□ -0.6
CLK3-218ENST00000566926 STEAP1Q9UHE8 339 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 DAPK2Q9UIK4 370 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 RABL2BQ9UNT1 228 aa11.29□□□□□ -0.6
CLK3-218ENST00000566926 H3BSH0 61 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 RGS5O15539 181 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 FOXH1O75593 365 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 CST4P01036 141 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 ADRA2CP18825 462 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 MAB21L1Q13394 359 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 FAM189A2Q15884 450 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 RAB11BQ15907 218 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 ASPHD2Q6ICH7 369 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 NR2C2APQ86WQ0 139 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 PNLDC1Q8NA58 520 aaKnown RBP11.28□□□□□ -0.6
CLK3-218ENST00000566926 DNAAF1Q8NEP3 725 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 OR13C9Q8NGT0 318 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 OR8S1Q8NH09 359 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 Q8TCH9 128 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 PATZ1Q9HBE1 687 aaKnown RBP11.28□□□□□ -0.6
CLK3-218ENST00000566926 LPAR2Q9HBW0 351 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 SPATA2Q9UM82 520 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 SLC7A11Q9UPY5 501 aa11.28□□□□□ -0.6
CLK3-218ENST00000566926 PPIAL4EA0A075B759 164 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 C5orf63A6NC05 138 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 PPIAL4DF5H284 164 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 APOA1P02647 267 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 UBBP0CG47 229 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 PPIAL4FP0DN26 164 aa11.27□□□□□ -0.61
CLK3-218ENST00000566926 FAHP16930 419 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms