RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 OSBPL10Q9BXB5 764 aa16.47■□□□□ 0.23
CLN6-207ENST00000566347 FAM234AQ9H0X4 552 aa16.47■□□□□ 0.23
CLN6-207ENST00000566347 RIBC2Q9H4K1 309 aa16.47■□□□□ 0.23
CLN6-207ENST00000566347 HEXA-AS1Q9H8Q6 139 aa16.47■□□□□ 0.23
CLN6-207ENST00000566347 HES4Q9HCC6 221 aa16.47■□□□□ 0.23
CLN6-207ENST00000566347 OAZ3Q9UMX2 235 aa16.47■□□□□ 0.23
CLN6-207ENST00000566347 A0A1W2PQL4 384 aaPredicted RBP16.46■□□□□ 0.23
CLN6-207ENST00000566347 A6NIN4 97 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 METTL15A6NJ78 407 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 SYT7O43581 403 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 CIB2O75838 187 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 TSPAN9O75954 239 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 IL24Q13007 206 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 HCP5Q6MZN7 132 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 OR10H4Q8NGA5 316 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 ADI1Q9BV57 179 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 USE1Q9NZ43 259 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 WNK1Q9H4A3 2382 aa16.46■□□□□ 0.23
CLN6-207ENST00000566347 GATBO75879 557 aaKnown RBP16.45■□□□□ 0.22
CLN6-207ENST00000566347 POLR2IP36954 125 aaKnown RBP16.45■□□□□ 0.22
CLN6-207ENST00000566347 CEBPDP49716 269 aaPredicted RBP16.45■□□□□ 0.22
CLN6-207ENST00000566347 KRTAP10-3P60369 221 aa16.45■□□□□ 0.22
CLN6-207ENST00000566347 ODF4Q2M2E3 257 aa16.45■□□□□ 0.22
CLN6-207ENST00000566347 TMEM200BQ69YZ2 307 aa16.45■□□□□ 0.22
CLN6-207ENST00000566347 CALHM1Q8IU99 346 aa16.45■□□□□ 0.22
CLN6-207ENST00000566347 MKXQ8IYA7 352 aa16.45■□□□□ 0.22
CLN6-207ENST00000566347 RORBQ92753 470 aa16.45■□□□□ 0.22
CLN6-207ENST00000566347 RBM4BQ9BQ04 359 aaKnown RBP16.45■□□□□ 0.22
CLN6-207ENST00000566347 OR14J1Q9UGF5 321 aa16.45■□□□□ 0.22
CLN6-207ENST00000566347 VWFP04275 2813 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 FAM230AA0A1W2PPH8 454 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 KCNAB3O43448 404 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 APOL3O95236 402 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 TK1P04183 234 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 CDC42P60953 191 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 ERVK11-1P61568 191 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 AANATQ16613 207 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 FAM220AQ7Z4H9 259 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 ANGPTL5Q86XS5 388 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 TRMT10AQ8TBZ6 339 aaKnown RBP16.44■□□□□ 0.22
CLN6-207ENST00000566347 SSX3Q99909 188 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 MEGF9Q9H1U4 602 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 MMP27Q9H306 513 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 TCF7L1Q9HCS4 588 aa16.44■□□□□ 0.22
CLN6-207ENST00000566347 H3BUX3 64 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 SERPINA3P01011 423 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 FUT6P51993 359 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 ERVFRD-1P60508 538 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 BATF2Q8N1L9 274 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 OR4M1Q8NGD0 313 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 TRUB1Q8WWH5 349 aaKnown RBP16.43■□□□□ 0.22
CLN6-207ENST00000566347 EME1Q96AY2 570 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 C10orf35Q96D05 121 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 CHST5Q9GZS9 411 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 PPA2Q9H2U2 334 aa16.43■□□□□ 0.22
CLN6-207ENST00000566347 SAC3D1A6NKF1 404 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 K7N7A8 449 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 UBCP0CG48 685 aaKnown RBP16.42■□□□□ 0.22
CLN6-207ENST00000566347 UBE2V2Q15819 145 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 LRRC75BQ2VPJ9 315 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 ASPHD2Q6ICH7 369 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 C11orf42Q8N5U0 333 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 ASCC1Q8N9N2 400 aaKnown RBP16.42■□□□□ 0.22
CLN6-207ENST00000566347 C17orf50Q8WW18 174 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 AJUBAQ96IF1 538 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 CEP19Q96LK0 163 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 RAB18Q9NP72 206 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 IMPAD1Q9NX62 359 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 GNG8Q9UK08 70 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 ORC6Q9Y5N6 252 aa16.42■□□□□ 0.22
CLN6-207ENST00000566347 H3BSH0 61 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 CHRM2P08172 466 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 CCL3L1P16619 93 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 LGALS4P56470 323 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 ISL1P61371 349 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 COL10A1Q03692 680 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 ZNF273Q14593 569 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 CNN3Q15417 329 aaKnown RBP16.41■□□□□ 0.22
CLN6-207ENST00000566347 PRSS35Q8N3Z0 413 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 PP6455Q8WZ26 134 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 UBE2FQ969M7 185 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 BORCS8Q96FH0 119 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 FBLN5Q9UBX5 448 aa16.41■□□□□ 0.22
CLN6-207ENST00000566347 CMYA5Q8N3K9 4069 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 LOC107986453A0A1B0GWG9 222 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 COX7A1P24310 79 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 GABRA5P31644 462 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 ACTC1P68032 377 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 ACTA1P68133 377 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 DEFA6Q01524 100 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 ZNF85Q03923 595 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 SLC35E4Q6ICL7 350 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 Q8IYB0 196 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 MTCH1Q9NZJ7 389 aa16.4■□□□□ 0.22
CLN6-207ENST00000566347 IGKV1-27A0A075B6S5 117 aa16.39■□□□□ 0.21
CLN6-207ENST00000566347 C17orf98A8MV24 154 aa16.39■□□□□ 0.21
CLN6-207ENST00000566347 ZNF737O75373 536 aa16.39■□□□□ 0.21
CLN6-207ENST00000566347 RBP4P02753 201 aa16.39■□□□□ 0.21
CLN6-207ENST00000566347 PIPP12273 146 aaPredicted RBP16.39■□□□□ 0.21
CLN6-207ENST00000566347 TP53I3Q53FA7 332 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms