RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ABHD14BQ96IU4 210 aa18.87■□□□□ 0.61
SPSB3-208ENST00000566339 C18orf12Q96KH6 178 aa18.87■□□□□ 0.61
SPSB3-208ENST00000566339 DUSP15Q9H1R2 295 aaPredicted RBP18.87■□□□□ 0.61
SPSB3-208ENST00000566339 METTL7AQ9H8H3 244 aa18.87■□□□□ 0.61
SPSB3-208ENST00000566339 MCTS1Q9ULC4 181 aaKnown RBP18.87■□□□□ 0.61
SPSB3-208ENST00000566339 PHF3Q92576 2039 aaKnown RBP18.87■□□□□ 0.61
SPSB3-208ENST00000566339 ZNF318Q5VUA4 2279 aa18.87■□□□□ 0.61
SPSB3-208ENST00000566339 MUC6Q6W4X9 2439 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 BTBD17A6NE02 478 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 AGPAT2O15120 278 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 PIAS2O75928 621 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 MBPP02686 304 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-208ENST00000566339 FABP1P07148 127 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 ZNF728P0DKX0 622 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 SRPXP78539 464 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 ATXN7L1Q9ULK2 861 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-208ENST00000566339 TMED3Q9Y3Q3 217 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 ZNF14P17017 642 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-208ENST00000566339 CSNK1A1P48729 337 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 PIGPP57054 158 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 OR8B8Q15620 311 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 FOXRED2Q8IWF2 684 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 CCDC71LQ8N9Z2 235 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 NANPQ8TBE9 248 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 SPTSSAQ969W0 71 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 PIGQQ9BRB3 760 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 KCNJ16Q9NPI9 418 aa18.86■□□□□ 0.61
SPSB3-208ENST00000566339 IGHV3-20A0A0C4DH32 117 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 ST8SIA3O43173 380 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 ZNF806P0C7X5 589 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 ACKR3P25106 362 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 ENDOGQ14249 297 aaKnown RBP18.85■□□□□ 0.61
SPSB3-208ENST00000566339 CNN3Q15417 329 aaKnown RBP18.85■□□□□ 0.61
SPSB3-208ENST00000566339 ABCA11PQ4W5N1 156 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 CARD17Q5XLA6 110 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 C16orf47Q6ZP98 133 aaPredicted RBP18.85■□□□□ 0.61
SPSB3-208ENST00000566339 RELTQ969Z4 430 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 TPSD1Q9BZJ3 242 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 SPACA1Q9HBV2 294 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 ZNF391Q9UJN7 358 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 PTRH2Q9Y3E5 179 aaKnown RBP18.85■□□□□ 0.61
SPSB3-208ENST00000566339 RP1P56715 2156 aa18.85■□□□□ 0.61
SPSB3-208ENST00000566339 UMAD1C9J7I0 102 aa18.84■□□□□ 0.61
SPSB3-208ENST00000566339 EIF1BO60739 113 aaKnown RBP18.84■□□□□ 0.61
SPSB3-208ENST00000566339 IFNA17P01571 189 aa18.84■□□□□ 0.61
SPSB3-208ENST00000566339 GALNTL5Q7Z4T8 443 aa18.84■□□□□ 0.61
SPSB3-208ENST00000566339 FAM185AQ8N0U4 392 aa18.84■□□□□ 0.61
SPSB3-208ENST00000566339 ERGIC1Q969X5 290 aa18.84■□□□□ 0.61
SPSB3-208ENST00000566339 WDR77Q9BQA1 342 aaPredicted RBP18.84■□□□□ 0.61
SPSB3-208ENST00000566339 MYOTQ9UBF9 498 aa18.84■□□□□ 0.61
SPSB3-208ENST00000566339 TCFL5Q9UL49 500 aa18.84■□□□□ 0.61
SPSB3-208ENST00000566339 PIGLQ9Y2B2 252 aa18.84■□□□□ 0.61
SPSB3-208ENST00000566339 IGKV1D-8A0A087WSZ0 117 aa18.83■□□□□ 0.61
SPSB3-208ENST00000566339 SHISA8B8ZZ34 492 aa18.83■□□□□ 0.61
SPSB3-208ENST00000566339 AP4M1O00189 453 aa18.83■□□□□ 0.61
SPSB3-208ENST00000566339 SNRNP70P08621 437 aaKnown RBP18.83■□□□□ 0.61
SPSB3-208ENST00000566339 CHATP28329 748 aa18.83■□□□□ 0.61
SPSB3-208ENST00000566339 H3F3AP84243 136 aa18.83■□□□□ 0.61
SPSB3-208ENST00000566339 CLINT1Q14677 625 aa18.83■□□□□ 0.61
SPSB3-208ENST00000566339 C6orf201Q7Z4U5 140 aa18.83■□□□□ 0.61
SPSB3-208ENST00000566339 RTN4IP1Q8WWV3 396 aaPredicted RBP18.83■□□□□ 0.61
SPSB3-208ENST00000566339 NAA11Q9BSU3 229 aaPredicted RBP18.83■□□□□ 0.61
SPSB3-208ENST00000566339 IL36GQ9NZH8 169 aa18.83■□□□□ 0.61
SPSB3-208ENST00000566339 C19orf25Q9UFG5 118 aaPredicted RBP18.83■□□□□ 0.61
SPSB3-208ENST00000566339 DKK1O94907 266 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 TMEM225BP0DP42 221 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 EIF2S3P41091 472 aaKnown RBP18.83■□□□□ 0.6
SPSB3-208ENST00000566339 NKAIN1Q4KMZ8 207 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 OR5D18Q8NGL1 313 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 HPSE2Q8WWQ2 592 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 MAFIPQ8WZ33 124 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 LIN37Q96GY3 246 aaPredicted RBP18.83■□□□□ 0.6
SPSB3-208ENST00000566339 EIF5A2Q9GZV4 153 aaKnown RBP18.83■□□□□ 0.6
SPSB3-208ENST00000566339 HIPK2Q9H2X6 1198 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 TMPRSS5Q9H3S3 457 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 GSN-AS1Q9NRJ2 163 aa18.83■□□□□ 0.6
SPSB3-208ENST00000566339 RYDENQ9NUL5 291 aaKnown RBP18.83■□□□□ 0.6
SPSB3-208ENST00000566339 NSG1A0A0A6YYJ2 146 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 M0R036 132 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 M0R135 149 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 MASP2O00187 686 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 TERTO14746 1132 aaKnown RBP18.82■□□□□ 0.6
SPSB3-208ENST00000566339 CDS2O95674 445 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 FAHP16930 419 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 CLDN17P56750 224 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 ZNF616Q08AN1 781 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 FABP9Q0Z7S8 132 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 ZNF266Q14584 549 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 SHBQ15464 509 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 LHFPL2Q6ZUX7 228 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 CPEB2Q7Z5Q1 589 aaKnown RBP18.82■□□□□ 0.6
SPSB3-208ENST00000566339 NABP1Q96AH0 204 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 ZNF799Q96GE5 643 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 MARS2Q96GW9 593 aaKnown RBP18.82■□□□□ 0.6
SPSB3-208ENST00000566339 CEP192Q8TEP8 1941 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 VPS13AQ96RL7 3174 aa18.82■□□□□ 0.6
SPSB3-208ENST00000566339 A0A1W2PNR3 127 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 ZNF814B7Z6K7 855 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 E9PLN8 166 aa18.81■□□□□ 0.6
SPSB3-208ENST00000566339 K7N7A8 449 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms