RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TAS2R20P59543 309 aa15.9■□□□□ 0.14
COMMD4-213ENST00000565834 SRSF1Q07955 248 aaKnown RBP eCLIP15.9■□□□□ 0.14
COMMD4-213ENST00000565834 EFNB3Q15768 340 aa15.9■□□□□ 0.14
COMMD4-213ENST00000565834 PRAMEF6Q5VXH4 476 aa15.9■□□□□ 0.14
COMMD4-213ENST00000565834 OSR2Q8N2R0 312 aa15.9■□□□□ 0.14
COMMD4-213ENST00000565834 MRPS24Q96EL2 167 aaKnown RBP15.9■□□□□ 0.14
COMMD4-213ENST00000565834 ABHD1Q96SE0 405 aa15.9■□□□□ 0.14
COMMD4-213ENST00000565834 SDHCQ99643 169 aaPredicted RBP15.9■□□□□ 0.14
COMMD4-213ENST00000565834 NICN1Q9BSH3 213 aa15.9■□□□□ 0.14
COMMD4-213ENST00000565834 CCDC32Q9BV29 185 aa15.9■□□□□ 0.14
COMMD4-213ENST00000565834 TLNRD1Q9H1K6 362 aa15.9■□□□□ 0.14
COMMD4-213ENST00000565834 SPTAN1Q13813 2472 aaKnown RBP15.9■□□□□ 0.14
COMMD4-213ENST00000565834 CACNA1DQ01668 2161 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 TRAV18A0A075B6X5 111 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 B9A039 149 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 RHBDL1O75783 438 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 TPPPO94811 219 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 CHRM2P08172 466 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 CPT2P23786 658 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 MNDAP41218 407 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 PTH2RP49190 550 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 SRP9P49458 86 aaKnown RBP15.89■□□□□ 0.13
COMMD4-213ENST00000565834 DAZAP2Q15038 168 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-213ENST00000565834 MOGAT2Q3SYC2 334 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 SNX29P2Q8IUI4 249 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 BATF2Q8N1L9 274 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 CELF2-AS1Q8N7Q2 184 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 OR56B1Q8NGI3 324 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 C15orf40Q8WUR7 153 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 MEGF10Q96KG7 1140 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 OR2V2Q96R30 315 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 DIRC2Q96SL1 478 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 TM2D1Q9BX74 207 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 A0A0A6YYD4 124 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 PRSS44E7EML9 344 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 RAB27BO00194 218 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 PTBP3O95758 552 aaKnown RBP15.89■□□□□ 0.13
COMMD4-213ENST00000565834 TNFAIP6P98066 277 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-213ENST00000565834 MPPED2Q15777 294 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 ELP2Q6IA86 826 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 OR8H2Q8N162 312 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 FBXL14Q8N1E6 418 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 Q8N402 240 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 Q8NFD4 153 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 OR10R2Q8NGX6 335 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 Q96M66 194 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 PALMDQ9NP74 551 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 DYNLRB1Q9NP97 96 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 UFSP2Q9NUQ7 469 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 RBFOX1Q9NWB1 397 aaKnown RBP15.89■□□□□ 0.13
COMMD4-213ENST00000565834 ARFGEF3Q5TH69 2177 aa15.89■□□□□ 0.13
COMMD4-213ENST00000565834 C17orf100A8MU93 164 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 HLA-DQB1P01920 261 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 ADH4P08319 380 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 C11orf53Q8IXP5 236 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 Q8IYB0 196 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 MUC15Q8N387 334 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 FAM89BQ8N5H3 189 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 CHST4Q8NCG5 386 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 ITLN1Q8WWA0 313 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 FBXW5Q969U6 566 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 ZNF488Q96MN9 340 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 NUDT16L1Q9BRJ7 211 aaKnown RBP15.88■□□□□ 0.13
COMMD4-213ENST00000565834 RHOFQ9HBH0 211 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 ABCB10Q9NRK6 738 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 IL19Q9UHD0 177 aa15.88■□□□□ 0.13
COMMD4-213ENST00000565834 LRRK2Q5S007 2527 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 F8VVB4 439 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 F8VWA3 439 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 UPK1BO75841 260 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 PGA5P0DJD9 388 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 GABRR1P24046 479 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 RBM11P57052 281 aaKnown RBP15.87■□□□□ 0.13
COMMD4-213ENST00000565834 FGF12P61328 243 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 MST1LQ2TV78 715 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 PIGYQ3MUY2 71 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 ST3GAL6Q9Y274 331 aa15.87■□□□□ 0.13
COMMD4-213ENST00000565834 hCG_1807616A0A1W2PRN6 198 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 A6NNC1 897 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 CTDSPLO15194 276 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 SOCS1O15524 211 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 AKR7A2O43488 359 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 ACAA1P09110 424 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-213ENST00000565834 PLA2G2AP14555 144 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 TAF9Q16594 264 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 ZNF181Q2M3W8 571 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 WDR82Q6UXN9 313 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 ZNF826PQ6ZT77 177 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 EMG1Q92979 244 aaKnown RBP15.86■□□□□ 0.13
COMMD4-213ENST00000565834 NRIP2Q9BQI9 281 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 MS4A5Q9H3V2 200 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 FN3KRPQ9HA64 309 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 C1orf123Q9NWV4 160 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 HRNRQ86YZ3 2850 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-213ENST00000565834 CD55P08174 381 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 CSF3P09919 207 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 PRKACAP17612 351 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 BLVRBP30043 206 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-213ENST00000565834 GATA4P43694 442 aa15.86■□□□□ 0.13
COMMD4-213ENST00000565834 SNRPD2P62316 118 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms