RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ADI1Q9BV57 179 aa7.26□□□□□ -1.25
VPS9D1-205ENST00000565452 NIPAL2Q9H841 368 aa7.26□□□□□ -1.25
VPS9D1-205ENST00000565452 SP140LQ9H930 580 aa7.26□□□□□ -1.25
VPS9D1-205ENST00000565452 MED20Q9H944 212 aa7.26□□□□□ -1.25
VPS9D1-205ENST00000565452 C14orf119Q9NWQ9 140 aa7.26□□□□□ -1.25
VPS9D1-205ENST00000565452 LHFPL6Q9Y693 200 aa7.26□□□□□ -1.25
VPS9D1-205ENST00000565452 SMAD5-AS1Q9Y6J3 95 aa7.26□□□□□ -1.25
VPS9D1-205ENST00000565452 HUWE1Q7Z6Z7 4374 aaKnown RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 IRGMA1A4Y4 181 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 GYPBP06028 91 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 OR2T7P0C7T2 308 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 CLUP10909 449 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 GABRB1P18505 474 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 MYCNOSP40205 109 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 ECI1P42126 302 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 THBS3P49746 956 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 ISL1P61371 349 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 GK2Q14410 553 aaPredicted RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 CCDC92Q53HC0 331 aaPredicted RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 HCP5Q6MZN7 132 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 SLC18B1Q6NT16 456 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 PGAP1Q75T13 922 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 DPY19L4Q7Z388 723 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 ERI1Q8IV48 349 aaKnown RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 ENTHD1Q8IYW4 607 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 C8orf59Q8N0T1 100 aaPredicted RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 FAM216BQ8N7L0 139 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 OR52H1Q8NGJ2 320 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 OR51L1Q8NGJ5 315 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 OR2T27Q8NH04 317 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 OTOSQ8NHW6 89 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 ZNRF4Q8WWF5 429 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 NRG4Q8WWG1 115 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 CYGBQ8WWM9 190 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 ASB17Q8WXJ9 295 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 SPTSSAQ969W0 71 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 C12orf43Q96C57 262 aaKnown RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 ISOC1Q96CN7 298 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 MRPS18AQ9NVS2 196 aaKnown RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 RAB26Q9ULW5 256 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 RPL36Q9Y3U8 105 aaKnown RBP7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 COMMD3-BMI1R4GMX3 469 aa7.25□□□□□ -1.25
VPS9D1-205ENST00000565452 A0A1B0GW55 424 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 hCG_1809904A0A1W2PP81 198 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 A0A1W2PPE2 198 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 A0A1W2PR64 198 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 A0A1W2PRV1 198 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 CCDC182A6NF36 153 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 TVP23AA6NH52 213 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 NKX6-3A6NJ46 265 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 ACOD1A6NK06 481 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 ZNF878C9JN71 531 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 RER1O15258 196 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 ZNF254O75437 659 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 RHBDL1O75783 438 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 LYNP07948 512 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DUX4L2P0CJ85 424 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DUX4L3P0CJ86 424 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DUX4L4P0CJ87 422 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DUX4L5P0CJ88 424 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DUX4L6P0CJ89 424 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DUX4L7P0CJ90 424 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 ALOX5APP20292 161 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 SLC6A1P30531 599 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DCTDP32321 178 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 ATP6V1E1P36543 226 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 NAA10P41227 235 aaPredicted RBP7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 TPTEP56180 551 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 CXCR4P61073 352 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 GRB2P62993 217 aaKnown RBP7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 MEP1BQ16820 701 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 TMEM95Q3KNT9 176 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DUX4L9Q6RFH8 374 aaPredicted RBP7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DCXRQ7Z4W1 244 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 KCTD20Q7Z5Y7 419 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 THAP5Q7Z6K1 395 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 OR6N2Q8NGY6 317 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 MALSU1Q96EH3 234 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 MRPL48Q96GC5 212 aaKnown RBP7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 CNN2Q99439 309 aaKnown RBP7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 ATF6BQ99941 703 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 ADAT1Q9BUB4 502 aaKnown RBP7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DNTTIP1Q9H147 329 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 Q9H521 79 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 PLCXD1Q9NUJ7 323 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 DUX4Q9UBX2 424 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 LAMP5Q9UJQ1 280 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 EXOGQ9Y2C4 368 aaKnown RBP7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 STARD9Q9P2P6 4700 aa7.24□□□□□ -1.25
VPS9D1-205ENST00000565452 A0A1W2PPH5 198 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 FAM90A8PA6NJQ4 464 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 CD300LBA8K4G0 201 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 ZNF670-ZNF695F2Z2N8 137 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 ENTPD6O75354 484 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 FADS2O95864 444 aaKnown RBP7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 LCATP04180 440 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 SPARCP09486 303 aa7.23□□□□□ -1.25
VPS9D1-205ENST00000565452 NDUFB7P17568 137 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms