RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 DMRTC1Q5HYR2 192 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 Q6ZRG5 221 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 DTX1Q86Y01 620 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 FOXRED2Q8IWF2 684 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 ZNF100Q8IYN0 542 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 TDHQ8IZJ6 230 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 SAP25Q8TEE9 199 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 WNT2BQ93097 391 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 BORCS8Q96FH0 119 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 REEP6Q96HR9 211 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 KIRREL1Q96J84 757 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 SULT4A1Q9BR01 284 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 FAAP24Q9BTP7 215 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 BCO1Q9HAY6 547 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 AK3Q9UIJ7 227 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 FAM96BQ9Y3D0 163 aa11.4□□□□□ -0.58
USB1-207ENST00000563149 LSM5Q9Y4Y9 91 aaKnown RBP11.4□□□□□ -0.58
USB1-207ENST00000563149 UNC80Q8N2C7 3258 aa11.4□□□□□ -0.59
USB1-207ENST00000563149 IGHV3-15A0A0B4J1V0 119 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 A0A0J9YW62 118 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 H7C1Q1 480 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 GPR137BO60478 399 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 KLK3P07288 261 aaPredicted RBP11.39□□□□□ -0.59
USB1-207ENST00000563149 CCL3P10147 92 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 RAC3P60763 192 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 IL13RA2Q14627 380 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 OR8B8Q15620 311 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 KRTAP27-1Q3LI81 207 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 ABCA11PQ4W5N1 156 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 SHEQ5VZ18 495 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 TMEM42Q69YG0 159 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 OR1F12Q8NHA8 337 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 CPT1CQ8TCG5 803 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 GNRHR2Q96P88 292 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 TECTBQ96PL2 329 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 UCN2Q96RP3 112 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 RGCCQ9H4X1 137 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 RNF122Q9H9V4 155 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 SMCO4Q9NRQ5 59 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 OCIAD1Q9NX40 245 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 XIRP2A4UGR9 3374 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 FAM157AC9JC47 383 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 F12P00748 615 aaPredicted RBP11.39□□□□□ -0.59
USB1-207ENST00000563149 IFNA4P05014 189 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 COX6A1P12074 109 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 ACKR3P25106 362 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 P2RY1P47900 373 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 RAB5CP51148 216 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 UCP2P55851 309 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 TAF9Q16594 264 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 LIAT1Q6ZQX7 453 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 C15orf54Q8N8G6 183 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 SNIP1Q8TAD8 396 aaKnown RBP11.39□□□□□ -0.59
USB1-207ENST00000563149 KCNE4Q8WWG9 221 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 RTN4IP1Q8WWV3 396 aaPredicted RBP11.39□□□□□ -0.59
USB1-207ENST00000563149 GINS3Q9BRX5 216 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 HDHD3Q9BSH5 251 aaPredicted RBP11.39□□□□□ -0.59
USB1-207ENST00000563149 AKIRIN1Q9H9L7 192 aaPredicted RBP11.39□□□□□ -0.59
USB1-207ENST00000563149 ZNF286AQ9HBT8 521 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 STARD10Q9Y365 291 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 STRAPQ9Y3F4 350 aaKnown RBP11.39□□□□□ -0.59
USB1-207ENST00000563149 TIMM10BQ9Y5J6 103 aa11.39□□□□□ -0.59
USB1-207ENST00000563149 FAM230AA0A1W2PPH8 454 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 MSTNO14793 375 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 MBPP02686 304 aaPredicted RBP11.38□□□□□ -0.59
USB1-207ENST00000563149 DUSP1P28562 367 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 CD80P33681 288 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 FUT6P51993 359 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 CHAF1BQ13112 559 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 LYSMD4Q5XG99 296 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 LGI3Q8N145 548 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 OSR2Q8N2R0 312 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 CCDC71LQ8N9Z2 235 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 RXFP4Q8TDU9 374 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 C18orf12Q96KH6 178 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 EGLN1Q9GZT9 426 aa11.38□□□□□ -0.59
USB1-207ENST00000563149 FBXO9Q9UK97 447 aaPredicted RBP11.38□□□□□ -0.59
USB1-207ENST00000563149 IGKV1-27A0A075B6S5 117 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 MEX3AA1L020 520 aaKnown RBP11.37□□□□□ -0.59
USB1-207ENST00000563149 OR6C6A6NF89 314 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 ZNF98A6NK75 572 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 C9J4A7 227 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 TNFSF11O14788 317 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 YKT6O15498 198 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 SPRY1O43609 319 aaPredicted RBP11.37□□□□□ -0.59
USB1-207ENST00000563149 TSPAN15O95858 294 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 NRASP01111 189 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 LCATP04180 440 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 CRYBA1P05813 215 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 UMODP07911 640 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 OR5AC1P0C628 307 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 DANCRP0C864 163 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 SRD5A2P31213 254 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 SNCAP37840 140 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 MLF1P58340 268 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 TRA2AQ13595 282 aaKnown RBP eCLIP11.37□□□□□ -0.59
USB1-207ENST00000563149 TMEM211Q6ICI0 200 aa11.37□□□□□ -0.59
USB1-207ENST00000563149 RPS19BP1Q86WX3 136 aaKnown RBP11.37□□□□□ -0.59
USB1-207ENST00000563149 FAM219AQ8IW50 185 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms