RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TRAV8-7A0A075B6U6 113 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 TRAV20A0A0B4J274 112 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 IGKV1-12A0A0C4DH73 117 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 FAM230AA0A1W2PPH8 454 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 KDM4BO94953 1096 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 IGKV1D-12P01611 117 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 UCHL1P09936 223 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 RAB3AP20336 220 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 PSMA1P25786 263 aaKnown RBP11.17□□□□□ -0.62
CDH1-204ENST00000562118 MAPK3P27361 379 aaPredicted RBP11.17□□□□□ -0.62
CDH1-204ENST00000562118 GABRA5P31644 462 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 SOX2P48431 317 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 TRAM1Q15629 374 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 KISS1Q15726 138 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 SFRP4Q6FHJ7 346 aaPredicted RBP11.17□□□□□ -0.62
CDH1-204ENST00000562118 FAM166AQ6J272 317 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 Q8IYB0 196 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 SVOPQ8N4V2 548 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 C19orf18Q8NEA5 215 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 PXT1Q8NFP0 134 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 OR51F2Q8NH61 342 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 NPRL2Q8WTW4 380 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 FCGR1BQ92637 280 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 SEH1LQ96EE3 360 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 SDSLQ96GA7 329 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 CCDC90BQ9GZT6 254 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 ZNF696Q9H7X3 374 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 NEK6Q9HC98 313 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 TMEM138Q9NPI0 162 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 NDUFB11Q9NX14 153 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 NLKQ9UBE8 527 aa11.17□□□□□ -0.62
CDH1-204ENST00000562118 PNMA8CA0A1B0GUJ8 204 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 F8VVB4 439 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 F8VWA3 439 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 SIGLEC5O15389 551 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 FOXH1O75593 365 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 GYPAP02724 150 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 PSG2P11465 335 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 RPS2P15880 293 aaKnown RBP11.16□□□□□ -0.62
CDH1-204ENST00000562118 GALP22466 123 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 GLRA1P23415 457 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 GATA3P23771 443 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 EEF1B2P24534 225 aaKnown RBP11.16□□□□□ -0.62
CDH1-204ENST00000562118 MTCP1P56278 107 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 SMIM21Q3B7S5 101 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 LIPKQ5VXJ0 399 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 WDR25Q64LD2 544 aaPredicted RBP11.16□□□□□ -0.62
CDH1-204ENST00000562118 ELP2Q6IA86 826 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 SLC25A26Q70HW3 274 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 OR8B3Q8NGG8 313 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 OR52N4Q8NGI2 321 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 TMEM186Q96B77 213 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 CPNE2Q96FN4 548 aaPredicted RBP11.16□□□□□ -0.62
CDH1-204ENST00000562118 CEP19Q96LK0 163 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 DMRTB1Q96MA1 342 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 GAFA1Q96PS6 74 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 OR8B2Q96RD0 313 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
CDH1-204ENST00000562118 PPIL3Q9H2H8 161 aaKnown RBP11.16□□□□□ -0.62
CDH1-204ENST00000562118 SMURF1Q9HCE7 757 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 IL36GQ9NZH8 169 aa11.16□□□□□ -0.62
CDH1-204ENST00000562118 WNK2Q9Y3S1 2297 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 NAV3Q8IVL0 2385 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 IGHV3OR15-7A0A075B7D8 119 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 MAGEA13PA6NCF6 341 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 OR2AT4A6NND4 320 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 A8MV72 311 aaPredicted RBP11.15□□□□□ -0.62
CDH1-204ENST00000562118 TRAPPC2LH3BP13 241 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 GABRPO00591 440 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 GPR37O15354 613 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 KNG1P01042 644 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 TGFBR2P37173 567 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 PITPNBP48739 271 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 RPS25P62851 125 aaKnown RBP11.15□□□□□ -0.62
CDH1-204ENST00000562118 INSL4Q14641 139 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 ZNF146Q15072 292 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 ACSM3Q53FZ2 586 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 ESCO2Q56NI9 601 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 SYT6Q5T7P8 510 aaPredicted RBP11.15□□□□□ -0.62
CDH1-204ENST00000562118 NLRC3Q7RTR2 1065 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 LRRTM1Q86UE6 522 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 MKXQ8IYA7 352 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 DEFB108BQ8NET1 73 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 TMIGD2Q96BF3 282 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 ORAI1Q96D31 301 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 ZNF488Q96MN9 340 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 NOX4Q9NPH5 578 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 PCDHB10Q9UN67 800 aa11.15□□□□□ -0.62
CDH1-204ENST00000562118 A0A1B0GW55 424 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 J3QLI3 93 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 TNFAIP8O95379 198 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 TGFAP01135 160 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 FSHBP01225 129 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 DUX4L2P0CJ85 424 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 DUX4L3P0CJ86 424 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 DUX4L4P0CJ87 422 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 DUX4L5P0CJ88 424 aa11.14□□□□□ -0.63
CDH1-204ENST00000562118 DUX4L6P0CJ89 424 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms