RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RABL2BQ9UNT1 228 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 KLHDC2Q9Y2U9 406 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 TRRAPQ9Y4A5 3859 aa11.34□□□□□ -0.59
SMAD3-214ENST00000560402 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 POM121CA8CG34 1229 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 FAM25AB3EWG3 89 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 FAM25CB3EWG5 89 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 FAM25GB3EWG6 89 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 PSMD9O00233 223 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 MAGEB4O15481 346 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-214ENST00000560402 CYB5R3P00387 301 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-214ENST00000560402 CD80P33681 288 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 PITPNBP48739 271 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 DBPQ10586 325 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-214ENST00000560402 MALLQ13021 153 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 TAF13Q15543 124 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 PCK2Q16822 640 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 KRTAP27-1Q3LI81 207 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 SFXN4Q6P4A7 337 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 UNQ9370/PRO34162Q6UXP9 181 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 DCDC5Q6ZRR9 648 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 MOGAT3Q86VF5 341 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 LAX1Q8IWV1 398 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 GDPD1Q8N9F7 314 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 BHLHE23Q8NDY6 225 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 OR11L1Q8NGX0 322 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 Q8TCH9 128 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 TSEN15Q8WW01 171 aaKnown RBP11.33□□□□□ -0.6
SMAD3-214ENST00000560402 DACT3Q96B18 629 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-214ENST00000560402 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-214ENST00000560402 OR14A2Q96R54 314 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 ATF6BQ99941 703 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 PDCD1LG2Q9BQ51 273 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 TMEM246Q9BRR3 403 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 SLC22A4Q9H015 551 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 MOB1AQ9H8S9 216 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 TMEM100Q9NV29 134 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 CKLFQ9UBR5 152 aa11.33□□□□□ -0.6
SMAD3-214ENST00000560402 F5H5P2 479 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 TBX1O43435 398 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 ZFPL1O95159 310 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 ACSM4P0C7M7 580 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 DCTDP32321 178 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 CD200P41217 278 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 INPP1P49441 399 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 NPY4RP50391 375 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 BPIFB3P59826 476 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 KCNJ8Q15842 424 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 OTPQ5XKR4 325 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 BAIAP2L2Q6UXY1 529 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 RHOUQ7L0Q8 258 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 DCXRQ7Z4W1 244 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 BCL6BQ8N143 479 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-214ENST00000560402 OR8H2Q8N162 312 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 SETD6Q8TBK2 473 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 UNKLQ9H9P5 680 aaKnown RBP11.32□□□□□ -0.6
SMAD3-214ENST00000560402 CLN8Q9UBY8 286 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 LRP12Q9Y561 859 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 R4GMQ9 66 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 PKD1L1Q8TDX9 2849 aa11.32□□□□□ -0.6
SMAD3-214ENST00000560402 KIR2DS1A0A191URI9 304 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 SMIM30A4D0T7 59 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 OR4C45A6NMZ5 311 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 ZNF878C9JN71 531 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 H0YL77 283 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 ENSAO43768 121 aaKnown RBP11.31□□□□□ -0.6
SMAD3-214ENST00000560402 GPANK1O95872 356 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 PTTG1O95997 202 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 UBCP0CG48 685 aaKnown RBP11.31□□□□□ -0.6
SMAD3-214ENST00000560402 IGHV4-38-2P0DP08 117 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 HSD11B1P28845 292 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 SCN1BQ07699 218 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 GK2Q14410 553 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-214ENST00000560402 SLC9A3R2Q15599 337 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 PYDC2Q56P42 97 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 BCL2L15Q5TBC7 163 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 TMEM244Q5VVB8 128 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 CORO6Q6QEF8 472 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 Q6ZNX1 250 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 CFAP77Q6ZQR2 320 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 CENPSQ8N2Z9 138 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 ZNF671Q8TAW3 534 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 CMTM3Q96MX0 182 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 DUX5Q96PT3 197 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 DERL3Q96Q80 235 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 NUDT16L1Q9BRJ7 211 aaKnown RBP11.31□□□□□ -0.6
SMAD3-214ENST00000560402 SP140LQ9H930 580 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 NOX4Q9NPH5 578 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 FRRS1LQ9P0K9 344 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 CYB5R1Q9UHQ9 305 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 DHDHQ9UQ10 334 aa11.31□□□□□ -0.6
SMAD3-214ENST00000560402 TRBV5-5A0A0J9YX44 114 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 ANXA2P2A6NMY6 339 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 PRR32B1ATL7 298 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 PFDN1O60925 122 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 APOC1P02654 83 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 ANXA2P07355 339 aaKnown RBP11.3□□□□□ -0.6
SMAD3-214ENST00000560402 SRMP19623 302 aa11.3□□□□□ -0.6
SMAD3-214ENST00000560402 RBMXP38159 391 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms