RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CEACAM18A8MTB9 384 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 A8MXK9 166 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 F5H0A9 414 aaPredicted RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 SMAD7O15105 426 aaKnown RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 LIPFP07098 398 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 UBBP0CG47 229 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 TMEM225BP0DP42 221 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 PSMB9P28065 219 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 FGF9P31371 208 aaPredicted RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 MTNR1BP49286 362 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 DVL1P1P54792 670 aaPredicted RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 ERVK11-1P61568 191 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 IL13RA1P78552 427 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 DDI2Q5TDH0 399 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 ELP2Q6IA86 826 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 FAM166AQ6J272 317 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 CD200R1LQ6Q8B3 271 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 ACP7Q6ZNF0 438 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 SLC25A26Q70HW3 274 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 GLCCI1Q86VQ1 547 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 CALHM1Q8IU99 346 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 ZNF561Q8N587 486 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 BOLLQ8N9W6 283 aaKnown RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 TBC1D15Q8TC07 691 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 NPRL2Q8WTW4 380 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 MRPS24Q96EL2 167 aaKnown RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 FGF23Q9GZV9 251 aaPredicted RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 METTL17Q9H7H0 456 aaPredicted RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 SMURF1Q9HCE7 757 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 NOX4Q9NPH5 578 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 SNTG1Q9NSN8 517 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 TMEM160Q9NX00 188 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 TAS2R4Q9NYW5 299 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 IL36GQ9NZH8 169 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 CLN8Q9UBY8 286 aa10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 SF3B6Q9Y3B4 125 aaKnown RBP10.09□□□□□ -0.79
RABGGTA-215ENST00000560207 ACANP16112 2415 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 HIVEP1P15822 2718 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 IGKV1-27A0A075B6S5 117 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 TRAV1-2A0A0B4J238 106 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 TRIM64CA6NLI5 447 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 C3orf80F5H4A9 247 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 J3QLI3 93 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 PDCD5O14737 125 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 TNFRSF13BO14836 293 aaPredicted RBP10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 AKR7A2O43488 359 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 NDUFB3O43676 98 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 TMEM127O75204 238 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 RHBDL1O75783 438 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 KDM4BO94953 1096 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 INMTO95050 263 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 MSMBP08118 114 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 JUNBP17275 347 aaPredicted RBP10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 PTGFRP43088 359 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 PITPNBP48739 271 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 POU3F4P49335 361 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 GNB2P62879 340 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 LRRC10Q5BKY1 277 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 STUMQ69YW2 141 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 ASCL4Q6XD76 172 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 LINC00596Q86U02 117 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 ANGPTL5Q86XS5 388 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 DEFB108BQ8NET1 73 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 PPP1R35Q8TAP8 253 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 SSBP3Q9BWW4 388 aaPredicted RBP10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 FAM234AQ9H0X4 552 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 OR5V1Q9UGF6 321 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 SSR3Q9UNL2 185 aa10.08□□□□□ -0.8
RABGGTA-215ENST00000560207 MALRD1Q5VYJ5 2156 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 A0A0G2JMP0 313 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 A0A0X1KG70 313 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 MAGEA13PA6NCF6 341 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 GABRPO00591 440 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 TMPRSS2O15393 492 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 ADAM20O43506 726 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 SYNGR1O43759 233 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 TGFAP01135 160 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 CSTBP04080 98 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 CHRM2P08172 466 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 IGHV4-31P0DP07 118 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 MYL9P24844 172 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 CD80P33681 288 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 CAV3P56539 151 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 ZNF146Q15072 292 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 RSU1Q15404 277 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 FAM189A2Q15884 450 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 SFRP4Q6FHJ7 346 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 CLEC9AQ6UXN8 241 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 ZNF788Q6ZQV5 615 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 SATL1Q86VE3 508 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 TPRA1Q86W33 373 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 LURAP1LQ8IV03 231 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 FAM58AQ8N1B3 248 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 CIARTQ8N365 385 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 CHST4Q8NCG5 386 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 Q8NFD4 153 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 OR4M2Q8NGB6 313 aa10.07□□□□□ -0.8
RABGGTA-215ENST00000560207 OR52N4Q8NGI2 321 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms