RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	OGG1	O15527	345 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	TFAP2A	P05549	437 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	PGA5	P0DJD9	388 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ATP1B3	P54709	279 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	IL24	Q13007	206 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	RBM48	Q5RL73	367 aa	Known RBP	11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	STUM	Q69YW2	141 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	POC1A	Q8NBT0	407 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ZNF485	Q8NCK3	441 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	RPS4Y2	Q8TD47	263 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	MYDGF	Q969H8	173 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SNTG1	Q9NSN8	517 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	DHDH	Q9UQ10	334 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ERGIC3	Q9Y282	383 aa		11.37	□□□□□ -0.59
CHRNB4-204	ENST00000559849		A0A087WXM4	84 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	IGKV1-9	A0A0C4DH69	117 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	OR2AT4	A6NND4	320 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	MYL12B	O14950	172 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	OCM2	P0CE71	109 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	OCM	P0CE72	109 aa	Predicted RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ATF1	P18846	271 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	DCTN2	Q13561	401 aa	Known RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	KRTAP21-3	Q3LHN1	58 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	PRIMA1	Q86XR5	153 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	PARP16	Q8N5Y8	322 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ANGPTL6	Q8NI99	470 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	GPR148	Q8TDV2	347 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SPSB1	Q96BD6	273 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SMIM19	Q96E16	107 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	MED30	Q96HR3	178 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ZCCHC4	Q9H5U6	513 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	NEK6	Q9HC98	313 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	TPRKB	Q9Y3C4	175 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	IGKV1-27	A0A075B6S5	117 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	IGHV2-70D	A0A0C4DH43	119 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	GPR37	O15354	613 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ALX3	O95076	343 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ECD	O95905	644 aa	Predicted RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	LALBA	P00709	142 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	MT-ND2	P03891	347 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	CDK1	P06493	297 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	AMY2B	P19961	511 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	AZGP1	P25311	298 aa	Known RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	MTCP1	P56278	107 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	WNT4	P56705	351 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	TAS2R43	P59537	309 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SMIM21	Q3B7S5	101 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	RNLS	Q5VYX0	342 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ACP7	Q6ZNF0	438 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ZNF788	Q6ZQV5	615 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	LHFPL2	Q6ZUX7	228 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	NANOGP1	Q8N7R0	232 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	NANP	Q8TBE9	248 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	TSEN15	Q8WW01	171 aa	Known RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	DACT3	Q96B18	629 aa	Predicted RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	NRIP2	Q9BQI9	281 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	MRI1	Q9BV20	369 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	RBM38	Q9H0Z9	239 aa	Known RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SMURF1	Q9HCE7	757 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	OPN4	Q9UHM6	478 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ZNF281	Q9Y2X9	895 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	AUP1	Q9Y679	476 aa		11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.36	□□□□□ -0.59
CHRNB4-204	ENST00000559849	NDUFB3	O43676	98 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	NXPH2	O95156	264 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	CD2	P06729	351 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	LIPF	P07098	398 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	PSG2	P11465	335 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	CRHBP	P24387	322 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	PAX8	Q06710	450 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SCGB2A2	Q13296	93 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	DMKN	Q6E0U4	476 aa	Predicted RBP	11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	OR13C9	Q8NGT0	318 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	GHSR	Q92847	366 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ZNF488	Q96MN9	340 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	OPALIN	Q96PE5	141 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	CDCA4	Q9BXL8	241 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	METRN	Q9UJH8	293 aa		11.35	□□□□□ -0.59
CHRNB4-204	ENST00000559849	NKX6-3	A6NJ46	265 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	TRIM64C	A6NLI5	447 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ENSA	O43768	121 aa	Known RBP	11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	EEF1B2	P24534	225 aa	Known RBP	11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	GABRA2	P47869	451 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	ERVK11-1	P61568	191 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SLC35A2	P78381	396 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	IL13RA1	P78552	427 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	LRRC10	Q5BKY1	277 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SATL1	Q86VE3	508 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	MKX	Q8IYA7	352 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	FAM216B	Q8N7L0	139 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	HES4	Q9HCC6	221 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	MTCH1	Q9NZJ7	389 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	COL6A5	A8TX70	2615 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	IGKV1D-17	A0A075B6S4	117 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SIGLEC5	O15389	551 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	SULT1B1	O43704	296 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	CYB5A	P00167	134 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	PPIAL4G	P0DN37	164 aa		11.34	□□□□□ -0.59
CHRNB4-204	ENST00000559849	IKZF1	Q13422	519 aa		11.34	□□□□□ -0.59

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