RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 IL4I1Q96RQ9 567 aa10□□□□□ -0.81
SPG11-219ENST00000559822 ADI1Q9BV57 179 aa10□□□□□ -0.81
SPG11-219ENST00000559822 CADM1Q9BY67 442 aaKnown RBP10□□□□□ -0.81
SPG11-219ENST00000559822 MEGF9Q9H1U4 602 aa10□□□□□ -0.81
SPG11-219ENST00000559822 RANBP3Q9H6Z4 567 aaPredicted RBP10□□□□□ -0.81
SPG11-219ENST00000559822 OR14J1Q9UGF5 321 aa10□□□□□ -0.81
SPG11-219ENST00000559822 MRM2Q9UI43 246 aaKnown RBP10□□□□□ -0.81
SPG11-219ENST00000559822 AP4S1Q9Y587 144 aa10□□□□□ -0.81
SPG11-219ENST00000559822 WNK1Q9H4A3 2382 aa10□□□□□ -0.81
SPG11-219ENST00000559822 A0A1B0GTI1 187 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 SYT7O43581 403 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 MITFO75030 526 aaPredicted RBP9.99□□□□□ -0.81
SPG11-219ENST00000559822 SULT1C4O75897 302 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 ATP5HO75947 161 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 RPP14O95059 124 aaKnown RBP9.99□□□□□ -0.81
SPG11-219ENST00000559822 TK1P04183 234 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 OR2T7P0C7T2 308 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 CCL1P22362 96 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 ATP6V1E1P36543 226 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 IL24Q13007 206 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 TMED1Q13445 227 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 TMEM200BQ69YZ2 307 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 SLC35E4Q6ICL7 350 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 HCP5Q6MZN7 132 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 PLEKHG7Q6ZR37 379 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 Q6ZTK2 550 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 MKXQ8IYA7 352 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 OR2T6Q8NHC8 308 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 RFKQ969G6 155 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 HES4Q9HCC6 221 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 SLC22A13Q9Y226 551 aa9.99□□□□□ -0.81
SPG11-219ENST00000559822 METTL15A6NJ78 407 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 M0R129 80 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 MAGEB4O15481 346 aaPredicted RBP9.98□□□□□ -0.81
SPG11-219ENST00000559822 SERPINA3P01011 423 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 RBP4P02753 201 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 CSF1P09603 554 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 EPHA2P29317 976 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 HTR1FP30939 366 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 KIR2DS4P43632 304 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 CEBPDP49716 269 aaPredicted RBP9.98□□□□□ -0.81
SPG11-219ENST00000559822 BNIP1Q12981 228 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 HERPUD1Q15011 391 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 C1orf146Q5VVC0 180 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 FAM220AQ7Z4H9 259 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 CATSPERDQ86XM0 798 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 ASCC1Q8N9N2 400 aaKnown RBP9.98□□□□□ -0.81
SPG11-219ENST00000559822 OR4M1Q8NGD0 313 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 OR8J1Q8NGP2 316 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 OR13D1Q8NGV5 346 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 FOXRED1Q96CU9 486 aaPredicted RBP9.98□□□□□ -0.81
SPG11-219ENST00000559822 C10orf35Q96D05 121 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 CEP19Q96LK0 163 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 OSBPL10Q9BXB5 764 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 NPFFR1Q9GZQ6 430 aa9.98□□□□□ -0.81
SPG11-219ENST00000559822 FAM230AA0A1W2PPH8 454 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 A6NIN4 97 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 K7N7A8 449 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 CYB5AP00167 134 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 CHRM2P08172 466 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 UBCP0CG48 685 aaKnown RBP9.97□□□□□ -0.81
SPG11-219ENST00000559822 CCL3L1P16619 93 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 COX7A1P24310 79 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 FUT6P51993 359 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 ERVK11-1P61568 191 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 CNN3Q15417 329 aaKnown RBP9.97□□□□□ -0.81
SPG11-219ENST00000559822 LY6EQ16553 131 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 ODF4Q2M2E3 257 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 GDPD3Q7L5L3 318 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 Q8IYB0 196 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 OR10H4Q8NGA5 316 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 TRMT10AQ8TBZ6 339 aaKnown RBP9.97□□□□□ -0.81
SPG11-219ENST00000559822 C17orf50Q8WW18 174 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 RORBQ92753 470 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 BORCS8Q96FH0 119 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 TBX5Q99593 518 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 CIB1Q99828 191 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 CDCA4Q9BXL8 241 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 CHST5Q9GZS9 411 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 ABCB10Q9NRK6 738 aa9.97□□□□□ -0.81
SPG11-219ENST00000559822 TBL2Q9Y4P3 447 aaKnown RBP9.97□□□□□ -0.81
SPG11-219ENST00000559822 TET2Q6N021 2002 aaPredicted RBP9.96□□□□□ -0.81
SPG11-219ENST00000559822 A0A1W2PQL4 384 aaPredicted RBP9.96□□□□□ -0.82
SPG11-219ENST00000559822 C17orf98A8MV24 154 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 VGLL3A8MV65 326 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 TSPAN15O95858 294 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 ZNF728P0DKX0 622 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 PIPP12273 146 aaPredicted RBP9.96□□□□□ -0.82
SPG11-219ENST00000559822 BMXP51813 675 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 EFNB2P52799 333 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 CDC42P60953 191 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 COL10A1Q03692 680 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 ZNF273Q14593 569 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 ZNF782Q6ZMW2 699 aaPredicted RBP9.96□□□□□ -0.82
SPG11-219ENST00000559822 SSX6Q7RTT6 188 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 ANGPTL5Q86XS5 388 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 ENTHD1Q8IYW4 607 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 BATF2Q8N1L9 274 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 C11orf42Q8N5U0 333 aa9.96□□□□□ -0.82
SPG11-219ENST00000559822 FAM110DQ8TAY7 271 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms