RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CNN3Q15417 329 aaKnown RBP12.92□□□□□ -0.34
LINC01220-201ENST00000558575 KCTD21Q4G0X4 260 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 LIPKQ5VXJ0 399 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 FAM166AQ6J272 317 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 SPSB1Q96BD6 273 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 BORCS8Q96FH0 119 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 PKIBQ9C010 78 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 PPIL3Q9H2H8 161 aaKnown RBP12.92□□□□□ -0.34
LINC01220-201ENST00000558575 MTCH1Q9NZJ7 389 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 ARHGAP32A7KAX9 2087 aa12.92□□□□□ -0.34
LINC01220-201ENST00000558575 TRAV8-7A0A075B6U6 113 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 TRAV38-1A0A0B4J264 116 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 SULT1B1O43704 296 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 SC5DO75845 299 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 GYPAP02724 150 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 TFF1P04155 84 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 CPEP16870 476 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 ATP1B3P54709 279 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 DEFA6Q01524 100 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 IL24Q13007 206 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 SSX1Q16384 188 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 ACSM3Q53FZ2 586 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 UBE2UQ5VVX9 321 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 ZNF773Q6PK81 442 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 ZNF841Q6ZN19 808 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 TMEM91Q6ZNR0 172 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 ZNF367Q7RTV3 350 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 BATF2Q8N1L9 274 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 MUC20Q8N307 709 aaPredicted RBP12.91□□□□□ -0.34
LINC01220-201ENST00000558575 SPICQ8N5J4 248 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 MS4A15Q8N5U1 240 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 POC1AQ8NBT0 407 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 OR5T2Q8NGG2 359 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 RFT1Q96AA3 541 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 DERL3Q96Q80 235 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 NRIP2Q9BQI9 281 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 TMED9Q9BVK6 235 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 CTSZQ9UBR2 303 aa12.91□□□□□ -0.34
LINC01220-201ENST00000558575 IGKV1-12A0A0C4DH73 117 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 A0A1B0GW55 424 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 MAGEA13PA6NCF6 341 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 IGKV1D-12P01611 117 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 CD2P06729 351 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DUX4L2P0CJ85 424 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DUX4L3P0CJ86 424 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DUX4L4P0CJ87 422 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DUX4L5P0CJ88 424 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DUX4L6P0CJ89 424 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DUX4L7P0CJ90 424 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 MUC1P15941 1255 aaPredicted RBP12.9□□□□□ -0.34
LINC01220-201ENST00000558575 RAB3AP20336 220 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 HNF1AP20823 631 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 GLRA1P23415 457 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 TGFBR2P37173 567 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 ZP1P60852 638 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 RPS25P62851 125 aaKnown RBP12.9□□□□□ -0.34
LINC01220-201ENST00000558575 PDZK1IP1Q13113 114 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 ARMCX4Q5H9R4 360 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 FAM27D1Q5T7N8 215 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DUX4L9Q6RFH8 374 aaPredicted RBP12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 LHFPL2Q6ZUX7 228 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 SLC25A26Q70HW3 274 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 LINC01356Q8N9X3 169 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 OR52N4Q8NGI2 321 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 UFD1Q92890 307 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 TMEM203Q969S6 136 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 NKX3-1Q99801 234 aaPredicted RBP12.9□□□□□ -0.34
LINC01220-201ENST00000558575 LPAR2Q9HBW0 351 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 HES4Q9HCC6 221 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 NOX4Q9NPH5 578 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 DUX4Q9UBX2 424 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 PCDHB10Q9UN67 800 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 LRCH1Q9Y2L9 728 aa12.9□□□□□ -0.34
LINC01220-201ENST00000558575 B4DSR2 109 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 ANGPTL7O43827 346 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 INMTO95050 263 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 PLATP00750 562 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 TGFAP01135 160 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 ALDOBP05062 364 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 NPBWR2P48146 333 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 KISS1Q15726 138 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 MICBQ29980 383 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
LINC01220-201ENST00000558575 STUMQ69YW2 141 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 ACP7Q6ZNF0 438 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 C1QL2Q7Z5L3 287 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 SVOPQ8N4V2 548 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 OR5D18Q8NGL1 313 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 ANGPTL6Q8NI99 470 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 SLAMF9Q96A28 289 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 RAB39BQ96DA2 213 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 CCL13Q99616 98 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 ZNF222Q9UK12 451 aa12.89□□□□□ -0.35
LINC01220-201ENST00000558575 IGKV1D-17A0A075B6S4 117 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 TRAPPC2LH3BP13 241 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 ADAM20O43506 726 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms