RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 OLFML2AQ68BL7 652 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 Q6ZSR3 168 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 RDH10Q8IZV5 341 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 ZNF561Q8N587 486 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 SLAMF9Q96A28 289 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 RNFT2Q96EX2 444 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 SLITRK2Q9H156 845 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 AASSQ9UDR5 926 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 MMP24Q9Y5R2 645 aa9.75□□□□□ -0.85
HERC1-202ENST00000558324 IGKV1-27A0A075B6S5 117 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 A0A1B0GUS0 222 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 DAPL1A0PJW8 107 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 CLPSL1A2RUU4 121 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 F8VVB4 439 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 F8VWA3 439 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 GATBO75879 557 aaKnown RBP9.74□□□□□ -0.85
HERC1-202ENST00000558324 CCL3L1P16619 93 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 COX7A1P24310 79 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 MPZP25189 248 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 UBE2E1P51965 193 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 ERVFRD-1P60508 538 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 RPL31P62899 125 aaKnown RBP9.74□□□□□ -0.85
HERC1-202ENST00000558324 TMED1Q13445 227 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 TMEM200BQ69YZ2 307 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 DHRS7BQ6IAN0 325 aaPredicted RBP9.74□□□□□ -0.85
HERC1-202ENST00000558324 HCP5Q6MZN7 132 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 BRICD5Q6PL45 260 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 C1orf122Q6ZSJ8 110 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 MKXQ8IYA7 352 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 CBR4Q8N4T8 237 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 ASCC1Q8N9N2 400 aaKnown RBP9.74□□□□□ -0.85
HERC1-202ENST00000558324 OR5D13Q8NGL4 314 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 C17orf50Q8WW18 174 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 HRASLS5Q96KN8 279 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 PKIBQ9C010 78 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 CHST5Q9GZS9 411 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 ZNF696Q9H7X3 374 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 HES4Q9HCC6 221 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 USE1Q9NZ43 259 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 VPREB3Q9UKI3 123 aa9.74□□□□□ -0.85
HERC1-202ENST00000558324 SF3B6Q9Y3B4 125 aaKnown RBP9.74□□□□□ -0.85
HERC1-202ENST00000558324 NOS1APO75052 506 aaPredicted RBP9.73□□□□□ -0.85
HERC1-202ENST00000558324 SERPINA3P01011 423 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 TK1P04183 234 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 UBCP0CG48 685 aaKnown RBP9.73□□□□□ -0.85
HERC1-202ENST00000558324 PAX6P26367 422 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 POU3F4P49335 361 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 ALDH3A2P51648 485 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 RPL15P61313 204 aaKnown RBP9.73□□□□□ -0.85
HERC1-202ENST00000558324 ISL1P61371 349 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 ERVK11-1P61568 191 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 ACTC1P68032 377 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 ACTA1P68133 377 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 COL10A1Q03692 680 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 ACSM1Q08AH1 577 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 IL24Q13007 206 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 ZNF273Q14593 569 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 ZFP1Q6P2D0 407 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 TREML4Q6UXN2 200 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 ZNF782Q6ZMW2 699 aaPredicted RBP9.73□□□□□ -0.85
HERC1-202ENST00000558324 GDPGP1Q6ZNW5 385 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 SLC25A26Q70HW3 274 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 TRUB1Q8WWH5 349 aaKnown RBP9.73□□□□□ -0.85
HERC1-202ENST00000558324 BORCS8Q96FH0 119 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 CEP19Q96LK0 163 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 MBOAT4Q96T53 435 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 MTCH1Q9NZJ7 389 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 RNF114Q9Y508 228 aa9.73□□□□□ -0.85
HERC1-202ENST00000558324 A0A1W2PPH5 198 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 H3BUX3 64 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 J3QLW9 94 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 SLC16A6O15403 523 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 CALCBP10092 127 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 ZNF19P17023 458 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 ZNF20P17024 532 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 BMXP51813 675 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 FUT6P51993 359 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 SNU13P55769 128 aaKnown RBP9.72□□□□□ -0.85
HERC1-202ENST00000558324 EDDM3BP56851 147 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 OR12D2P58182 307 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 NANOS3P60323 173 aaKnown RBP9.72□□□□□ -0.85
HERC1-202ENST00000558324 SNRPGP62308 76 aaKnown RBP9.72□□□□□ -0.85
HERC1-202ENST00000558324 EDDM3AQ14507 147 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 CNN3Q15417 329 aaKnown RBP9.72□□□□□ -0.85
HERC1-202ENST00000558324 LY6EQ16553 131 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 MEDAGQ5VYS4 303 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 Q6ZSV7 163 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 OR2G2Q8NGZ5 317 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 LINC01006Q8NI28 216 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 EMG1Q92979 244 aaKnown RBP9.72□□□□□ -0.85
HERC1-202ENST00000558324 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
HERC1-202ENST00000558324 ADAT3Q96EY9 351 aaPredicted RBP9.72□□□□□ -0.85
HERC1-202ENST00000558324 PPA2Q9H2U2 334 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 FRRS1LQ9P0K9 344 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 IL36RNQ9UBH0 155 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 GMPPBQ9Y5P6 360 aa9.72□□□□□ -0.85
HERC1-202ENST00000558324 HTR1AP08908 422 aa9.71□□□□□ -0.86
HERC1-202ENST00000558324 OCM2P0CE71 109 aa9.71□□□□□ -0.86
HERC1-202ENST00000558324 OCMP0CE72 109 aaPredicted RBP9.71□□□□□ -0.86
HERC1-202ENST00000558324 RBP2P50120 134 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms