RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TPK1Q9H3S4 243 aa2.74□□□□□ -1.97
TDP1-217ENST00000557782 RBFOX1Q9NWB1 397 aaKnown RBP2.74□□□□□ -1.97
TDP1-217ENST00000557782 ATPIF1Q9UII2 106 aa2.74□□□□□ -1.97
TDP1-217ENST00000557782 SLC22A13Q9Y226 551 aa2.74□□□□□ -1.97
TDP1-217ENST00000557782 TP53TG1Q9Y2A0 90 aa2.74□□□□□ -1.97
TDP1-217ENST00000557782 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.74□□□□□ -1.97
TDP1-217ENST00000557782 ABCC11Q96J66 1382 aa2.74□□□□□ -1.97
TDP1-217ENST00000557782 ASTN1O14525 1302 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 NOTCH4Q99466 2003 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 A0A087WYN8 130 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 ZNF705GA8MUZ8 300 aaPredicted RBP2.73□□□□□ -1.97
TDP1-217ENST00000557782 INS-IGF2F8WCM5 200 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 AZIN1O14977 448 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 DCTN3O75935 186 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 INSP01308 110 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 GIG44P09565 113 aaPredicted RBP2.73□□□□□ -1.97
TDP1-217ENST00000557782 CD99P14209 185 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 TAC1P20366 129 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 PRSS3P35030 304 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 RCVRNP35243 200 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 PPP1R2P41236 205 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 SLCO1A2P46721 670 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 NMUP48645 174 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 CCL23P55773 120 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 CRADDP78560 199 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 FAM3AP98173 230 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 PPIDQ08752 370 aaKnown RBP2.73□□□□□ -1.97
TDP1-217ENST00000557782 PNOCQ13519 176 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 RSPO1Q2MKA7 263 aaPredicted RBP2.73□□□□□ -1.97
TDP1-217ENST00000557782 KRTAP27-1Q3LI81 207 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 ATP6AP1LQ52LC2 224 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 ACSM3Q53FZ2 586 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 SPIN4Q56A73 249 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 CLEC12AQ5QGZ9 265 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 CST9Q5W186 159 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 KDM4DQ6B0I6 523 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 SPOPLQ6IQ16 392 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 PPP1R2P3Q6NXS1 205 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 Q6ZSR6 202 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 NCCRP1Q6ZVX7 275 aaPredicted RBP2.73□□□□□ -1.97
TDP1-217ENST00000557782 C6orf120Q7Z4R8 191 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 CPNE9Q8IYJ1 553 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 CEND1Q8N111 149 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 ZCCHC24Q8N2G6 241 aaKnown RBP2.73□□□□□ -1.97
TDP1-217ENST00000557782 SUMF2Q8NBJ7 301 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 SLC26A10Q8NG04 563 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 TTLQ8NG68 377 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 TYMSOSQ8TAI1 123 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 ENKURQ8TC29 256 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 SMIM8Q96KF7 97 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 KCNS1Q96KK3 526 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 PLEKHF1Q96S99 279 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 NUDT9Q9BW91 350 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 SUCNR1Q9BXA5 334 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 CDCA4Q9BXL8 241 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 SLC22A4Q9H015 551 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 SLC40A1Q9NP59 571 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 MMP26Q9NRE1 261 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 ZNF580Q9UK33 172 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 ENPP4Q9Y6X5 453 aa2.73□□□□□ -1.97
TDP1-217ENST00000557782 NRCAMQ92823 1304 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.72□□□□□ -1.97
TDP1-217ENST00000557782 TRAV8-2A0A0B4J237 113 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 A0A1W2PQL4 384 aaPredicted RBP2.72□□□□□ -1.97
TDP1-217ENST00000557782 C21orf140B9A014 251 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 CXCR6O00574 342 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 ACOX3O15254 700 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 IGLV2-23P01705 113 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 IGKV5-2P06315 115 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 HSD11B1P28845 292 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 IFNGR2P38484 337 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 CXCL5P42830 114 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 LGALS7P47929 136 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 ACOT2P49753 483 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 DR1Q01658 176 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 GLO1Q04760 184 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 CDC20Q12834 499 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 TMED2Q15363 201 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 C4orf26Q17RF5 130 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 TMEM255AQ5JRV8 349 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 CLVS2Q5SYC1 327 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 KCTD16Q68DU8 428 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 CD200R1LQ6Q8B3 271 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 DGAT2L6Q6ZPD8 337 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 FAM19A5Q7Z5A7 132 aaPredicted RBP2.72□□□□□ -1.97
TDP1-217ENST00000557782 ZNF329Q86UD4 541 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 TRAPPC5Q8IUR0 188 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 OR4P4Q8NGL7 312 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 OR1J4Q8NGS1 313 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 ERMNQ8TAM6 284 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 RAB8BQ92930 207 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 PTX4Q96A99 478 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 OR4K3Q96R72 315 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 CAMK2N2Q96S95 79 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 MRPL20Q9BYC9 149 aaKnown RBP2.72□□□□□ -1.97
TDP1-217ENST00000557782 METTL17Q9H7H0 456 aaPredicted RBP2.72□□□□□ -1.97
TDP1-217ENST00000557782 SLC2A9Q9NRM0 540 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 DMAC2Q9NW81 257 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 ZNF225Q9UK10 706 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 LRRC42Q9Y546 428 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms