RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 RAB40AQ8WXH6 277 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 TMEM246Q9BRR3 403 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 BEX1Q9HBH7 125 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 ZNF281Q9Y2X9 895 aa13.81□□□□□ -0.2
NEK9-211ENST00000557673 IGHV2-70DA0A0C4DH43 119 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 A6NLC8 198 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 PLATP00750 562 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 GRPP07492 148 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 IGHV4-38-2P0DP08 117 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 MAP2K4P45985 399 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 MED22Q15528 200 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 ZNF404Q494X3 552 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 FAM76BQ5HYJ3 339 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 KCTD8Q6ZWB6 473 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 MOB3CQ70IA8 216 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 UTS2BQ765I0 119 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 NLRC3Q7RTR2 1065 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 OR5A2Q8NGI9 324 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 OR13C5Q8NGS8 318 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 OR4F5Q8NH21 305 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 GHSRQ92847 366 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 FGGYQ96C11 551 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 RNF170Q96K19 258 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 TECTBQ96PL2 329 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 HIST1H2AAQ96QV6 131 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 DHDHQ9UQ10 334 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 LRRC42Q9Y546 428 aa13.8□□□□□ -0.2
NEK9-211ENST00000557673 TRBV5-5A0A0J9YX44 114 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 ZNF732B4DXR9 585 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 FSTL3O95633 263 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 CD1AP06126 327 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 CELP19835 753 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 RPS11P62280 158 aaKnown RBP eCLIP13.79□□□□□ -0.2
NEK9-211ENST00000557673 PAX2Q02962 417 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 UBE2V2Q15819 145 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 YIF1BQ5BJH7 314 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 ZNF826PQ6ZT77 177 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 ZNF367Q7RTV3 350 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 C11orf53Q8IXP5 236 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 BOLLQ8N9W6 283 aaKnown RBP13.79□□□□□ -0.2
NEK9-211ENST00000557673 NPRL2Q8WTW4 380 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 ACOT13Q9NPJ3 140 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 C1orf123Q9NWV4 160 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 VWFP04275 2813 aa13.79□□□□□ -0.2
NEK9-211ENST00000557673 IGHV3OR16-10A0A075B7F0 116 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 TRAV40A0A0B4J280 105 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 IGKV1-9A0A0C4DH69 117 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 KIR2DS1A0A191URI9 304 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 hCG_1807616A0A1W2PRN6 198 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 PQLC2LA1A4F0 135 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 HOXA3O43365 443 aaPredicted RBP13.78□□□□□ -0.2
NEK9-211ENST00000557673 OMGP23515 440 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 SOX2P48431 317 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 MLLT11Q13015 90 aaPredicted RBP13.78□□□□□ -0.2
NEK9-211ENST00000557673 CNN3Q15417 329 aaKnown RBP13.78□□□□□ -0.2
NEK9-211ENST00000557673 ASPHD2Q6ICH7 369 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 ZNF773Q6PK81 442 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 LYPD2Q6UXB3 125 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 WDR82Q6UXN9 313 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 SVOPQ8N4V2 548 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 PARP16Q8N5Y8 322 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 SCCPDHQ8NBX0 429 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 OR8B3Q8NGG8 313 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 TRMT10AQ8TBZ6 339 aaKnown RBP13.78□□□□□ -0.2
NEK9-211ENST00000557673 RPL3LQ92901 407 aaKnown RBP13.78□□□□□ -0.2
NEK9-211ENST00000557673 NEIL1Q96FI4 390 aaPredicted RBP13.78□□□□□ -0.2
NEK9-211ENST00000557673 OPALINQ96PE5 141 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 OR8B2Q96RD0 313 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 OR51I2Q9H344 312 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 PRDM13Q9H4Q3 707 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 ISYNA1Q9NPH2 558 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 NOX4Q9NPH5 578 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 RNF7Q9UBF6 113 aa13.78□□□□□ -0.2
NEK9-211ENST00000557673 FAM181BA6NEQ2 426 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 SRRM5B3KS81 715 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 M0QZ24 198 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 SERPINA3P01011 423 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 CD2P06729 351 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 OCM2P0CE71 109 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 PITPNBP48739 271 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 Q499Y3 187 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 DOCK11Q5JSL3 2073 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 GPR157Q5UAW9 335 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 DCDC5Q6ZRR9 648 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 SPARTQ8N0X7 666 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 GCSAMQ8N6F7 178 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 OR13C9Q8NGT0 318 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 WFDC12Q8WWY7 111 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 UFD1Q92890 307 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 TMEM106AQ96A25 262 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 SPSB1Q96BD6 273 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 SLC7A11Q9UPY5 501 aa13.77□□□□□ -0.21
NEK9-211ENST00000557673 C3orf80F5H4A9 247 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 J3QT63 122 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 CDIPTO14735 213 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 TIMM23O14925 209 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 HSMCR30P0CW71 290 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 ATF1P18846 271 aa13.76□□□□□ -0.21
NEK9-211ENST00000557673 AZGP1P25311 298 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms