RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ACKR3P25106 362 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 HSD11B1P28845 292 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 SAA4P35542 130 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 EFNB2P52799 333 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 EIF2B1Q14232 305 aaKnown RBP8.13□□□□□ -1.11
SCFD1-220ENST00000556486 MICAQ29983 383 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 C16orf89Q6UX73 402 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 FAM57BQ71RH2 274 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 ARHGAP24Q8N264 748 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 OR14K1Q8NGZ2 314 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 OTOSQ8NHW6 89 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 C17orf50Q8WW18 174 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 HPSE2Q8WWQ2 592 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 OR5P3Q8WZ94 311 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 SEH1LQ96EE3 360 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 GAFA1Q96PS6 74 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 GPHA2Q96T91 129 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 AMELYQ99218 206 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 RTL8AQ9BWD3 113 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 MUC13Q9H3R2 512 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 PPP1R3EQ9H7J1 279 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 NIPAL2Q9H841 368 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 FAM30AQ9NZY2 134 aa8.13□□□□□ -1.11
SCFD1-220ENST00000556486 A0A1W2PPH5 198 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 A0A1W2PRX2 142 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 NKX6-3A6NJ46 265 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 H3BUX3 64 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 XPNPEP2O43895 674 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 SOX14O95416 240 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 ACAA1P09110 424 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-220ENST00000556486 ATP6V1B2P21281 511 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 KIR2DS4P43632 304 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 DGUOKQ16854 277 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 OR2T5Q6IEZ7 315 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 LCN8Q6JVE9 175 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 CRIP3Q6Q6R5 217 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 KCTD20Q7Z5Y7 419 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 DEFB107AQ8IZN7 70 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 OR5D13Q8NGL4 314 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 OR6N2Q8NGY6 317 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 OR2T29Q8NH02 315 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 RORBQ92753 470 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 FGF23Q9GZV9 251 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-220ENST00000556486 MEGF9Q9H1U4 602 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 WDR13Q9H1Z4 485 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 RANBP3Q9H6Z4 567 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-220ENST00000556486 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
SCFD1-220ENST00000556486 ARMC1Q9NVT9 282 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 SLC25A10Q9UBX3 287 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-220ENST00000556486 ZNF222Q9UK12 451 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 LRP12Q9Y561 859 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 MAB21L2Q9Y586 359 aa8.12□□□□□ -1.11
SCFD1-220ENST00000556486 IGKV1D-17A0A075B6S4 117 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 MEIOCA2RUB1 952 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 ACOD1A6NK06 481 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 OR2AT4A6NND4 320 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 B5MCH6 92 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 PAHP00439 452 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 LYNP07948 512 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 SELLP14151 372 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 MNAT1P51948 309 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 KRTAP10-11P60412 298 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 PRDX4Q13162 271 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 HCP5Q6MZN7 132 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 ERI1Q8IV48 349 aaKnown RBP8.11□□□□□ -1.11
SCFD1-220ENST00000556486 PAPD5Q8NDF8 572 aaKnown RBP8.11□□□□□ -1.11
SCFD1-220ENST00000556486 OR4S1Q8NGB4 309 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 SDSLQ96GA7 329 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 PGAM5Q96HS1 289 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 NKX3-1Q99801 234 aaPredicted RBP8.11□□□□□ -1.11
SCFD1-220ENST00000556486 CENPOQ9BU64 300 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 FAM234AQ9H0X4 552 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 OR51I2Q9H344 312 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 REEP1Q9H902 201 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 ARL8BQ9NVJ2 186 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 VNN3Q9NY84 501 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 NLKQ9UBE8 527 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 SAMHD1Q9Y3Z3 626 aaKnown RBP8.11□□□□□ -1.11
SCFD1-220ENST00000556486 N6AMT1Q9Y5N5 214 aa8.11□□□□□ -1.11
SCFD1-220ENST00000556486 A0A0U1RQV5 110 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 OR5B21A6NL26 309 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 FAM183AA6NL82 134 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 ZNF850A8MQ14 1090 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 AKR7A2O43488 359 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 RRP9O43818 475 aaKnown RBP8.1□□□□□ -1.11
SCFD1-220ENST00000556486 IGLV3-1P01715 115 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 H2BFMP0C1H6 154 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 ATP6V1B1P15313 513 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 PAICSP22234 425 aaKnown RBP8.1□□□□□ -1.11
SCFD1-220ENST00000556486 GNG3P63215 75 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 DEGS2Q6QHC5 323 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 PIGWQ7Z7B1 504 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 ZDHHC23Q8IYP9 409 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 OR10G2Q8NGC3 310 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 OR5T2Q8NGG2 359 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 OR8B12Q8NGG6 310 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 OR4C13Q8NGP0 309 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 OR5K1Q8NHB7 308 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 TEX47Q8TBZ9 253 aa8.1□□□□□ -1.11
SCFD1-220ENST00000556486 RPL3LQ92901 407 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms