RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 EFCAB9A8MZ26 197 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 BHLHE40O14503 412 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 RHBDL1O75783 438 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 PAX6P26367 422 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 DDOSTP39656 456 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 SLC9A3P48764 834 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 MRPL19P49406 292 aaKnown RBP3.85□□□□□ -1.79
ATXN3-239ENST00000556315 RAB13P51153 203 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 CAV3P56539 151 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 STX1BP61266 288 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 PRKCDQ05655 676 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 ST3GAL3Q11203 375 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 FHL1Q13642 323 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 PCK2Q16822 640 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 CYP51A1Q16850 503 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 DGUOKQ16854 277 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 DNAL1Q4LDG9 190 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 MESTQ5EB52 335 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 TCTEX1D4Q5JR98 221 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 C10orf25Q5T742 122 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 OTPQ5XKR4 325 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 DPY19L4Q7Z388 723 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 OAFQ86UD1 273 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 NAA40Q86UY6 237 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 FUNDC1Q8IVP5 155 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 FAM185AQ8N0U4 392 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 OR5T2Q8NGG2 359 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 OR8S1Q8NH09 359 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 RPS4Y2Q8TD47 263 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 C2CD4CQ8TF44 421 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 MYDGFQ969H8 173 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 SPDL1Q96EA4 605 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 MALSU1Q96EH3 234 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 NSL1Q96IY1 281 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 Q96M85 177 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 C7orf26Q96N11 449 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 OR52B2Q96RD2 323 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 PITX2Q99697 317 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 ASCL2Q99929 193 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 BTBD10Q9BSF8 475 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 IFT27Q9BW83 186 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 C1orf21Q9H246 121 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 SYT4Q9H2B2 425 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 RERGLQ9H628 205 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 NMNAT1Q9HAN9 279 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-239ENST00000556315 MRGBPQ9NV56 204 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 HAO2Q9NYQ3 351 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 SLC25A10Q9UBX3 287 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-239ENST00000556315 RPS6KA6Q9UK32 745 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 DHDHQ9UQ10 334 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 POLR1DQ9Y2S0 133 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 LHFPL6Q9Y693 200 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 DYNC2H1Q8NCM8 4307 aaKnown RBP3.85□□□□□ -1.79
ATXN3-239ENST00000556315 TANC2Q9HCD6 1990 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 TRAV27A0A087WT01 109 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 hCG_1809904A0A1W2PP81 198 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 A0A1W2PPE2 198 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 A0A1W2PPH5 198 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 A0A1W2PR64 198 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 A0A1W2PRV1 198 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 NKX6-3A6NJ46 265 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 SH2D7A6NKC9 451 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-239ENST00000556315 ANKRD30BLA7E2S9 258 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CDIPTO14735 213 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 SNNO75324 88 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-239ENST00000556315 FKBP6O75344 327 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 TIPRLO75663 272 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 ACAA1P09110 424 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CCDC159P0C7I6 412 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CHATP28329 748 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CRABP1P29762 137 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 MYCNOSP40205 109 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 VHLP40337 213 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CENPAP49450 140 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 DYNLT3P51808 116 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 SPIBQ01892 262 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 ZNF92Q03936 586 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 TRAP1Q12931 704 aaKnown RBP3.84□□□□□ -1.79
ATXN3-239ENST00000556315 IL13RA2Q14627 380 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 SLC36A3Q495N2 470 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 ZBED5Q49AG3 693 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 PXDC1Q5TGL8 231 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 TMEM268Q5VZI3 342 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 STUMQ69YW2 141 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 GPR139Q6DWJ6 353 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CGB2Q6NT52 195 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 DNM1P34Q6PK57 102 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CORO6Q6QEF8 472 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 WDR82Q6UXN9 313 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 DLEU7Q6UYE1 221 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CCDC80Q76M96 950 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 FAM122BQ7Z309 247 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 TMEM219Q86XT9 240 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 NRMQ8IXM6 262 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 MKXQ8IYA7 352 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 MICU2Q8IYU8 434 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 RNF113BQ8IZP6 322 aaKnown RBP3.84□□□□□ -1.79
ATXN3-239ENST00000556315 CYB561A3Q8NBI2 242 aa3.84□□□□□ -1.79
ATXN3-239ENST00000556315 OR1M1Q8NGA1 313 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms