RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 C2orf76Q3KRA6 126 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 C1orf100Q5SVJ3 147 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 HIST2H3PS2Q5TEC6 136 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SFRP4Q6FHJ7 346 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 GLDNQ6ZMI3 551 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 HIST2H3AQ71DI3 136 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 CDH26Q8IXH8 852 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 ZCCHC24Q8N2G6 241 aaKnown RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF283Q8N7M2 679 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 NUP37Q8NFH4 326 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 OR13C3Q8NGS6 347 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SLC25A40Q8TBP6 338 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF431Q8TF32 576 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SPTSSAQ969W0 71 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 SLC25A28Q96A46 364 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 VRK1Q99986 396 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 MRPL37Q9BZE1 423 aaKnown RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 OR2J1Q9GZK6 312 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 PLK3Q9H4B4 646 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 MOB1AQ9H8S9 216 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 TMEM165Q9HC07 324 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 PNRC2Q9NPJ4 139 aaKnown RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 MYEF2Q9P2K5 600 aaKnown RBP8.45□□□□□ -1.06
PSEN1-213ENST00000555386 GTF2A1LQ9UNN4 478 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 STARD10Q9Y365 291 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 HSPB11Q9Y547 144 aa8.45□□□□□ -1.06
PSEN1-213ENST00000555386 MAST4O15021 2626 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 TMEM272A0A1B0GTI8 110 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 TMEM269A0A1B0GVZ9 245 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 LOC107986453A0A1B0GWG9 222 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF878C9JN71 531 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 M0R135 149 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 ALX3O95076 343 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 CD8AP01732 235 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 MELTFP08582 738 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 ACSM4P0C7M7 580 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 DANCRP0C864 163 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 AKAIN1P0CW23 69 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 COX5BP10606 129 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 RAB6AP20340 208 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 PRSS3P35030 304 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 GLRXP35754 106 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 MPV17P39210 176 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 ALDH3B1P43353 468 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 RPS23P62266 143 aaKnown RBP8.44□□□□□ -1.06
PSEN1-213ENST00000555386 SNRPD2P62316 118 aaKnown RBP8.44□□□□□ -1.06
PSEN1-213ENST00000555386 IKZF1Q13422 519 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 HLXQ14774 488 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-213ENST00000555386 RBMS2Q15434 407 aaKnown RBP8.44□□□□□ -1.06
PSEN1-213ENST00000555386 ODF4Q2M2E3 257 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 RSPO1Q2MKA7 263 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-213ENST00000555386 GFOD2Q3B7J2 385 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 ASPHD2Q6ICH7 369 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 UTS2BQ765I0 119 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF799Q96GE5 643 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 BCL2L14Q9BZR8 327 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF436Q9C0F3 470 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-213ENST00000555386 DYNLRB1Q9NP97 96 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 CBLN4Q9NTU7 201 aa8.44□□□□□ -1.06
PSEN1-213ENST00000555386 C5orf63A6NC05 138 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 ARPC1BO15143 372 aaKnown RBP8.43□□□□□ -1.06
PSEN1-213ENST00000555386 LDLRAD4O15165 306 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 CREBL2O60519 120 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-213ENST00000555386 NDUFS7O75251 213 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 SCGNO76038 276 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 ALDOBP05062 364 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 CXCL3P19876 107 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 C4BPBP20851 252 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 GCH1P30793 250 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 CX3CR1P49238 355 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 VEGFCP49767 419 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 KLF3P57682 345 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-213ENST00000555386 SELENOVP59797 346 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 ECH1Q13011 328 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 NKPD1Q17RQ9 610 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 DEFB113Q30KQ7 82 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 PCGF3Q3KNV8 242 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF718Q3SXZ3 478 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 TMEM255AQ5JRV8 349 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF626Q68DY1 528 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 RAB12Q6IQ22 244 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 UNQ6126/PRO20091Q6UXV3 157 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 FAM57BQ71RH2 274 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 LYPD6Q86Y78 171 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 ELMOD2Q8IZ81 293 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 KLF14Q8TD94 323 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-213ENST00000555386 GPX8Q8TED1 209 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 ASB13Q8WXK3 278 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 GCDHQ92947 438 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-213ENST00000555386 PIGTQ969N2 578 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 MRPL24Q96A35 216 aaKnown RBP8.43□□□□□ -1.06
PSEN1-213ENST00000555386 DACT3Q96B18 629 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-213ENST00000555386 SORCS2Q96PQ0 1159 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 ZNF442Q9H7R0 627 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 DLL4Q9NR61 685 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 FAM206AQ9NX38 181 aa8.43□□□□□ -1.06
PSEN1-213ENST00000555386 NKIRAS2Q9NYR9 191 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms