RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 EEA1Q15075 1411 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 NCOA1Q15788 1441 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 ARHGAP31Q2M1Z3 1444 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 AQRO60306 1485 aaKnown RBP eCLIP1.57□□□□□ -2.167e-7■■□□□ 11.4
VRK1-202ENST00000553683 DOCK8Q8NF50 2099 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 COL5A1P20908 1838 aaPredicted RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 KIAA0586Q9BVV6 1533 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 KDM5BQ9UGL1 1544 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 GLI2P10070 1586 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 KIR2DS1A0A191URI9 304 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 A0A1W2PPE3 182 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 C9orf170A2RU37 121 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 C9JVG2 144 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 E7EWF7 191 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 H3BN98 237 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 K7EP13 123 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SIVA1O15304 175 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 AQP9O43315 295 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SOX15O60248 233 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 FADS1O60427 444 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SHOX2O60902 331 aaPredicted RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 GABARAPO95166 117 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 FADS2O95864 444 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 CST1P01037 141 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 TCRBP04435 133 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 ERCC1P07992 297 aaPredicted RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 FAM228BP0C875 321 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 UBCP0CG48 685 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 THRAP10827 490 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 KCNE1P15382 129 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 ELK4P28324 431 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SLC6A1P30531 599 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 HNRNPH3P31942 346 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 HRH1P35367 487 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 CFHR2P36980 270 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 AQP2P41181 271 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 CDKN2BP42772 138 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 C21orf59P57076 290 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 MAGOHP61326 146 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 KCNJ2P63252 427 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 ELF3P78545 371 aaPredicted RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 FGL1Q08830 312 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 STX4Q12846 297 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 BNIP2Q12982 314 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 FLOT2Q14254 428 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 POU6F1Q14863 301 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 KIR2DS1Q14954 304 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 TAF1AQ15573 450 aaPredicted RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 SLC9A3R2Q15599 337 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 KLHL12Q53G59 568 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 H3F3CQ6NXT2 135 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 RNASEKQ6P5S7 137 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 SPESP1Q6UW49 350 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 CYHR1Q6ZMK1 362 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SLC25A48Q6ZT89 311 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 SSX9Q7RTT3 188 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 ASCL5Q7RTU5 278 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SLC16A14Q7RTX9 510 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 MRPL21Q7Z2W9 205 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 HORMAD1Q86X24 394 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 DHFR2Q86XF0 187 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 BOD1L2Q8IYS8 172 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 MICU2Q8IYU8 434 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 OR2G2Q8NGZ5 317 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 NUBPLQ8TB37 319 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 CA5BP1Q8WTZ4 195 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 FAM172AQ8WUF8 416 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 RNF133Q8WVZ7 376 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.57□□□□□ -2.16
VRK1-202ENST00000553683 C10orf35Q96D05 121 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 TCEAL4Q96EI5 215 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 PIK3IP1Q96FE7 263 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 TMEM56Q96MV1 263 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 RILPQ96NA2 401 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 ZNF382Q96SR6 550 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 EBNA1BP2Q99848 306 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 RNF5Q99942 180 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SULT4A1Q9BR01 284 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 ZNF251Q9BRH9 671 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 DDA1Q9BW61 102 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 C1orf198Q9H425 327 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 NMRAL1Q9HBL8 299 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 IFT46Q9NQC8 304 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 TAS2R1Q9NYW7 299 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 VAPAQ9P0L0 249 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 PIGLQ9Y2B2 252 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 ARL2BPQ9Y2Y0 163 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 CSDC2Q9Y534 153 aaKnown RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 TSSC4Q9Y5U2 329 aaPredicted RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 NPTNQ9Y639 398 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 KPTNQ9Y664 436 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 USH1CQ9Y6N9 552 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 TMEM56-RWDD3S4R434 201 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 USP9XQ93008 2570 aaPredicted RBP1.57□□□□□ -2.16
VRK1-202ENST00000553683 ALKQ9UM73 1620 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 SHROOM3Q8TF72 1996 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 CLUHO75153 1309 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 NUP155O75694 1391 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 NID2Q14112 1375 aa1.57□□□□□ -2.16
VRK1-202ENST00000553683 RTL9Q8NET4 1388 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms