RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TMEM246Q9BRR3 403 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 PPIAL4AQ9Y536 164 aa12.41□□□□□ -0.42
MTHFD1-204ENST00000553405 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.4□□□□□ -0.421e-8■■■■■ 43.9
MTHFD1-204ENST00000553405 OOEPA6NGQ2 149 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 H7C1Q1 480 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 ANGPTL7O43827 346 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 ARL6IP5O75915 188 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 KDM4BO94953 1096 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 PLATP00750 562 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 MAS1P04201 325 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 SFTPBP07988 381 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 IRF2P14316 349 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 USF1P22415 310 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 ZNF93P35789 620 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 OR3A4PP47883 348 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 POU3F4P49335 361 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 KRTAP1-1Q07627 177 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 C1orf100Q5SVJ3 147 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 SFRP4Q6FHJ7 346 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 ACP7Q6ZNF0 438 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 SLC16A12Q6ZSM3 486 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 PXT1Q8NFP0 134 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 ANGPTL6Q8NI99 470 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 ZNF671Q8TAW3 534 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 SLAMF9Q96A28 289 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 C12orf43Q96C57 262 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 TIMD4Q96H15 378 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 CENPOQ9BU64 300 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 RNF167Q9H6Y7 350 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 CNTD2Q9H8S5 307 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 SNTG1Q9NSN8 517 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 POLDIP2Q9Y2S7 368 aa12.4□□□□□ -0.42
MTHFD1-204ENST00000553405 IGKV1D-17A0A075B6S4 117 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 IGHV3OR15-7A0A075B7D8 119 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 A0A0G2JK05 382 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 MEGF11A6BM72 1044 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 IGHV2-5P01817 119 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 MUC1P15941 1255 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 BCL3P20749 454 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 CFPP27918 469 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 PTGFRP43088 359 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 ELP2Q6IA86 826 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 LYPD2Q6UXB3 125 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 BATF2Q8N1L9 274 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 NKAIN3Q8N8D7 197 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 BOLLQ8N9W6 283 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 MAPK1IP1LQ8NDC0 245 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 DEFB108BQ8NET1 73 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 OR4D6Q8NGJ1 314 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 OR51F2Q8NH61 342 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 SLC25A28Q96A46 364 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 CEP19Q96LK0 163 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 CHCHD6Q9BRQ6 235 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 UQCC2Q9BRT2 126 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 FUNDC2Q9BWH2 189 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 NEK6Q9HC98 313 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 RBFOX1Q9NWB1 397 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 RASL12Q9NYN1 266 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 IL36GQ9NZH8 169 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 IL36RNQ9UBH0 155 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 MALRD1Q5VYJ5 2156 aa12.39□□□□□ -0.43
MTHFD1-204ENST00000553405 MTORP42345 2549 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 ABCA1O95477 2261 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 A0A1B0GW55 424 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 TFF1P04155 84 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DUX4L2P0CJ85 424 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DUX4L3P0CJ86 424 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DUX4L4P0CJ87 422 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DUX4L5P0CJ88 424 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DUX4L6P0CJ89 424 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DUX4L7P0CJ90 424 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 PSG2P11465 335 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 GLRA1P23415 457 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DUX4L9Q6RFH8 374 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 ZNF841Q6ZN19 808 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 GDPGP1Q6ZNW5 385 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DCDC5Q6ZRR9 648 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 PEG10Q86TG7 708 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 MKXQ8IYA7 352 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 MUC20Q8N307 709 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 TNFAIP8L1Q8WVP5 186 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 NAA50Q9GZZ1 169 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 NARFLQ9H6Q4 476 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 PATZ1Q9HBE1 687 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 TCF7L1Q9HCS4 588 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 KAAG1Q9UBP8 84 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 DUX4Q9UBX2 424 aa12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 AK6Q9Y3D8 172 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-204ENST00000553405 TRAV38-1A0A0B4J264 116 aa12.37□□□□□ -0.43
MTHFD1-204ENST00000553405 FAM157AC9JC47 383 aa12.37□□□□□ -0.43
MTHFD1-204ENST00000553405 SLC22A1O15245 554 aa12.37□□□□□ -0.43
MTHFD1-204ENST00000553405 MAGEB3O15480 346 aa12.37□□□□□ -0.43
MTHFD1-204ENST00000553405 CDRT1O95170 752 aa12.37□□□□□ -0.43
MTHFD1-204ENST00000553405 WNT2P09544 360 aa12.37□□□□□ -0.43
MTHFD1-204ENST00000553405 OCMP0CE72 109 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms