RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ZNF233A6NK53 670 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 MKRN2OSH3BPM6 223 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 CLDN34H7C241 214 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 CRXO43186 299 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 ZNF324O75467 553 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 CYB5R3P00387 301 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 GP1BAP07359 652 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 MUC1P15941 1255 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 HLA-GP17693 338 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 TAC1P20366 129 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 LRPPRCP42704 1394 aaKnown RBP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 TUFMP49411 452 aaKnown RBP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 XKP51811 444 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 CD164Q04900 197 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 TRDNQ13061 729 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 MAPRE2Q15555 327 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 TRAM1Q15629 374 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 FAM222AQ5U5X8 452 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 IQCF2Q8IXL9 164 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 CYP4Z2PQ8N1L4 340 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 OR4K17Q8NGC6 315 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 ORAOV1Q8WV07 137 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 RORBQ92753 470 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 CPNE4Q96A23 557 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 OR10C1Q96KK4 312 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 QKIQ96PU8 341 aaKnown RBP eCLIP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 MED10Q9BTT4 135 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 TBL1XR1Q9BZK7 514 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 DIABLOQ9NR28 239 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 SIRT7Q9NRC8 400 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 CA10Q9NS85 328 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 ZNHIT6Q9NWK9 470 aaKnown RBP3.06□□□□□ -1.92
SCFD1-209ENST00000553280 DNAJC27Q9NZQ0 273 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 OPN4Q9UHM6 478 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 SNX24Q9Y343 169 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 URGCP-MRPS24S4R325 110 aa3.06□□□□□ -1.92
SCFD1-209ENST00000553280 NACAE9PAV3 2078 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 LOC102724200A0A096LPH7 203 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-209ENST00000553280 A0A1B0GTI1 187 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 TMEM72A0PK05 275 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 TNFAIP8O95379 198 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 RLN2P04090 185 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 RPA3P35244 121 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-209ENST00000553280 CMC4P56277 68 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-209ENST00000553280 MAP3K7CLP57077 242 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 TAS2R43P59537 309 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 RPL10AP62906 217 aaKnown RBP3.05□□□□□ -1.92
SCFD1-209ENST00000553280 PMS2P3Q13401 168 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 FLOT2Q14254 428 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 DMC1Q14565 340 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 SHHQ15465 462 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 TRIP13Q15645 432 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-209ENST00000553280 CLEC12AQ5QGZ9 265 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 MORN3Q6PF18 240 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-209ENST00000553280 CYP4Z1Q86W10 505 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 ORMDL3Q8N138 153 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 LINC00337Q8N6G1 96 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 ACBD4Q8NC06 268 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 ZNF738Q8NE65 137 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 BLNKQ8WV28 456 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 NELFBQ8WX92 580 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 LINC00167Q96N53 147 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 MRPL20Q9BYC9 149 aaKnown RBP3.05□□□□□ -1.92
SCFD1-209ENST00000553280 NDEL1Q9GZM8 345 aa3.05□□□□□ -1.92
SCFD1-209ENST00000553280 STX18Q9P2W9 335 aaKnown RBP3.05□□□□□ -1.92
SCFD1-209ENST00000553280 IGHV1-3A0A0C4DH29 117 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 IGKV1-6A0A0C4DH72 117 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 KIR2DS1A0A191URI9 304 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 GOLGA8IPA6NC78 632 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 UPK2O00526 184 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 RCBTB2O95199 551 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 MPZL1O95297 269 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 IGKV1-39P01597 117 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 MAS1P04201 325 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 IGKV1D-39P04432 117 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 NELFEP18615 380 aaKnown RBP3.04□□□□□ -1.92
SCFD1-209ENST00000553280 TEAD1P28347 426 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 UGT2B10P36537 528 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 HTR2BP41595 481 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 CRATP43155 626 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 SLC18A1P54219 525 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 PRKCDQ05655 676 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 ZNF816Q0VGE8 651 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-209ENST00000553280 EBI3Q14213 229 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 PIGHQ14442 188 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-209ENST00000553280 LINC00303Q3SY05 128 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 KCTD16Q68DU8 428 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 SPATA24Q86W54 205 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 OR7G1Q8NGA0 311 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 OR2AE1Q8NHA4 323 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 UBA3Q8TBC4 463 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 LRRC45Q96CN5 670 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 STARD4Q96DR4 205 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 ZMYND19Q96E35 227 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-209ENST00000553280 PARP11Q9NR21 331 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 TAS2R5Q9NYW4 299 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 RAB22AQ9UL26 194 aa3.04□□□□□ -1.92
SCFD1-209ENST00000553280 KLF13Q9Y2Y9 288 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms