RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TIMD4Q96H15 378 aa10.91□□□□□ -0.66
RAB5C-206ENST00000550406 CHCHD6Q9BRQ6 235 aa10.91□□□□□ -0.66
RAB5C-206ENST00000550406 TCF7L1Q9HCS4 588 aa10.91□□□□□ -0.66
RAB5C-206ENST00000550406 SNTG1Q9NSN8 517 aa10.91□□□□□ -0.66
RAB5C-206ENST00000550406 CKLFQ9UBR5 152 aa10.91□□□□□ -0.66
RAB5C-206ENST00000550406 MAP1AP78559 2803 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-206ENST00000550406 TRAV1-2A0A0B4J238 106 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 FCN3O75636 299 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 ARL6IP5O75915 188 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 KDM4BO94953 1096 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 SFTPBP07988 381 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 OCMP0CE72 109 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-206ENST00000550406 USF1P22415 310 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-206ENST00000550406 GLRA1P23415 457 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 TGFBR1P36897 503 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 MDH2P40926 338 aaKnown RBP10.9□□□□□ -0.66
RAB5C-206ENST00000550406 OR3A4PP47883 348 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 TMEM155Q4W5P6 130 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 PEG10Q86TG7 708 aaKnown RBP10.9□□□□□ -0.66
RAB5C-206ENST00000550406 CDH26Q8IXH8 852 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 MKXQ8IYA7 352 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 SAXO1Q8IYX7 474 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 ZSCAN4Q8NAM6 433 aaPredicted RBP10.9□□□□□ -0.66
RAB5C-206ENST00000550406 OR5T2Q8NGG2 359 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 OR4D6Q8NGJ1 314 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 CENPOQ9BU64 300 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 FUNDC2Q9BWH2 189 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 CNTD2Q9H8S5 307 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 NEK6Q9HC98 313 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 EXOSC4Q9NPD3 245 aaKnown RBP10.9□□□□□ -0.66
RAB5C-206ENST00000550406 IL36RNQ9UBH0 155 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 POLDIP2Q9Y2S7 368 aa10.9□□□□□ -0.66
RAB5C-206ENST00000550406 AK6Q9Y3D8 172 aaKnown RBP10.9□□□□□ -0.66
RAB5C-206ENST00000550406 MED13LQ71F56 2210 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 A0A1B0GW55 424 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 ISPDA4D126 451 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 MEGF11A6BM72 1044 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 CEACAM18A8MTB9 384 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 F5H0A9 414 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-206ENST00000550406 MAGEB3O15480 346 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 IGHV2-5P01817 119 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 GYPAP02724 150 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 DUX4L2P0CJ85 424 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 DUX4L3P0CJ86 424 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 DUX4L4P0CJ87 422 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 DUX4L5P0CJ88 424 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 DUX4L6P0CJ89 424 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 DUX4L7P0CJ90 424 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 TMEM225BP0DP42 221 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 CALCBP10092 127 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 PSG2P11465 335 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 MUC1P15941 1255 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-206ENST00000550406 PTGFRP43088 359 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 FAM166AQ6J272 317 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 DUX4L9Q6RFH8 374 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-206ENST00000550406 SLC16A12Q6ZSM3 486 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 NR2C2APQ86WQ0 139 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 PXT1Q8NFP0 134 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 ANGPTL6Q8NI99 470 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 TNFAIP8L1Q8WVP5 186 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 CEP19Q96LK0 163 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 C1orf147Q96MC9 270 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-206ENST00000550406 GPER1Q99527 375 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 TMUB1Q9BVT8 246 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 NAA50Q9GZZ1 169 aaKnown RBP10.89□□□□□ -0.67
RAB5C-206ENST00000550406 PATZ1Q9HBE1 687 aaKnown RBP10.89□□□□□ -0.67
RAB5C-206ENST00000550406 RBFOX1Q9NWB1 397 aaKnown RBP10.89□□□□□ -0.67
RAB5C-206ENST00000550406 RASL12Q9NYN1 266 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 DUX4Q9UBX2 424 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 ZNF222Q9UK12 451 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 SSR3Q9UNL2 185 aa10.89□□□□□ -0.67
RAB5C-206ENST00000550406 IGKV1D-17A0A075B6S4 117 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 TRAV38-1A0A0B4J264 116 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 A0A0G2JK05 382 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 LOC100506127A0A0U1RQW1 187 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 NXPH2O95156 264 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 CDRT1O95170 752 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 WNT2P09544 360 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 OR10A3P58181 314 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 SEC61A1P61619 476 aaKnown RBP10.88□□□□□ -0.67
RAB5C-206ENST00000550406 C1orf100Q5SVJ3 147 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 ATPAF1Q5TC12 328 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-206ENST00000550406 STUMQ69YW2 141 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 ZNF841Q6ZN19 808 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 MUC20Q8N307 709 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-206ENST00000550406 JAGN1Q8N5M9 183 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 NKAIN3Q8N8D7 197 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 Q8NFD4 153 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 OR10K1Q8NGX5 313 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 SLC25A28Q96A46 364 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 C1orf159Q96HA4 380 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 COX4I2Q96KJ9 171 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 SMURF1Q9HCE7 757 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 NLKQ9UBE8 527 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 CTSZQ9UBR2 303 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 ING4Q9UNL4 249 aa10.88□□□□□ -0.67
RAB5C-206ENST00000550406 A0A1W2PP11 408 aa10.87□□□□□ -0.67
RAB5C-206ENST00000550406 OR2AT4A6NND4 320 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms