RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PATZ1Q9HBE1 687 aaKnown RBP9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 NOSIPQ9Y314 301 aaKnown RBP9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 FSTP19883 344 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 TAS2R30P59541 319 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 POLR2GP62487 172 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 DRAM2Q6UX65 266 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 C9orf40Q8IXQ3 194 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 OR10J5Q8NHC4 309 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 OR10C1Q96KK4 312 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 SAMD10Q9BYL1 202 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 ANXA10Q9UJ72 324 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 CACNA1DQ01668 2161 aa9.04□□□□□ -0.96
SMARCC2-209ENST00000550164 IGLV1-36A0A0B4J1U3 117 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LY86O95711 162 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 ACTL6AO96019 429 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 PATE4P0C8F1 98 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LPAR6P43657 344 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 PSMB3P49720 205 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 MSMO1Q15800 293 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 KCNIP4Q6PIL6 250 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LYZL2Q7Z4W2 148 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 HOGA1Q86XE5 327 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 C17orf78Q8N4C9 275 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 PTX4Q96A99 478 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 GNRHR2Q96P88 292 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 SMIM7Q9BQ49 75 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LPAR5Q9H1C0 372 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 PLEKHF2Q9H8W4 249 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 GCM1Q9NP62 436 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 HDGFL3Q9Y3E1 203 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 TIMM8BQ9Y5J9 83 aaPredicted RBP9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 POMT1Q9Y6A1 747 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 CCDC187A0A096LP49 1063 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 DXOO77932 396 aaKnown RBP9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LYPD3O95274 346 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 CD8AP01732 235 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 UBE2NP61088 152 aaKnown RBP9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 ZNF528Q3MIS6 628 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 ABHD17BQ5VST6 288 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 CDH20Q9HBT6 801 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 GPR132Q9UNW8 380 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 PPP1R3CQ9UQK1 317 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LIPGQ9Y5X9 500 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 MDC1Q14676 2089 aaKnown RBP9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 A0A096LPE4 126 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 A0A1W2PPZ6 126 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 RNF222A6NCQ9 220 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 DHODHQ02127 395 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 TMEM41BQ5BJD5 291 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 OR2B11Q5JQS5 317 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 C1orf100Q5SVJ3 147 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LHFPL2Q6ZUX7 228 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 MCTS1Q9ULC4 181 aaKnown RBP9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LAMP3Q9UQV4 416 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 A0A1W2PPQ1 181 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 MSGN1A6NI15 193 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 CXCL13O43927 109 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 GLULP15104 373 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 HAAOP46952 286 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 ANKRD55Q3KP44 614 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 EDEM2Q9BV94 578 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 WDR13Q9H1Z4 485 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 SLC26A1Q9H2B4 701 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 PARP11Q9NR21 331 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 TMED3Q9Y3Q3 217 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 NLRC5Q86WI3 1866 aa9.03□□□□□ -0.96
SMARCC2-209ENST00000550164 LIPT2A6NK58 231 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 TNFSF11O14788 317 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 ADAM20O43506 726 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 EIF3GO75821 320 aaKnown RBP eCLIP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 TGIF1Q15583 401 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 PDLIM3Q53GG5 364 aaPredicted RBP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 FAM209BQ5JX69 171 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 OR13G1Q8NGZ3 307 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 LILRB1Q8NHL6 650 aaPredicted RBP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 UBALD1Q8TB05 177 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 AQP3Q92482 292 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 FGF11Q92914 225 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 SPACA9Q96E40 222 aaPredicted RBP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 TIMM10BQ9Y5J6 103 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 FUT3P21217 361 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 LY6G6FQ5SQ64 297 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 EXTL1Q92935 676 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 SPSB1Q96BD6 273 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 ADAM19Q9H013 955 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 RCC2Q9P258 522 aaKnown RBP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 A0A1W2PQD3 144 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 RBFOX3A6NFN3 312 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 HMGB3O15347 200 aaKnown RBP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 YIF1AO95070 293 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 FKBP2P26885 142 aaKnown RBP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 SULT1A2P50226 295 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 DUSP3P51452 185 aaPredicted RBP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 ZNF705AQ6ZN79 300 aaPredicted RBP9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 DYRK2Q92630 601 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 DUSP23Q9BVJ7 150 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 REG4Q9BYZ8 158 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 C5orf66Q9H5L9 145 aa9.02□□□□□ -0.97
SMARCC2-209ENST00000550164 PLEKHA3Q9HB20 300 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms