RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 SULT1C4O75897 302 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 MPZP25189 248 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 ACSM1Q08AH1 577 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 TP53I3Q53FA7 332 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 FAM220AQ7Z4H9 259 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 MKXQ8IYA7 352 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 LINC01006Q8NI28 216 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 RFKQ969G6 155 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 UBE2FQ969M7 185 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 PKIBQ9C010 78 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 HES4Q9HCC6 221 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 IMPAD1Q9NX62 359 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 GNG8Q9UK08 70 aa13.34□□□□□ -0.27
VPS29-207ENST00000549970 SF3B6Q9Y3B4 125 aaKnown RBP13.34□□□□□ -0.27
VPS29-207ENST00000549970 WIPF1O43516 503 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 INMTO95050 263 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 KRTAP10-3P60369 221 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 ZNF85Q03923 595 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 TMED1Q13445 227 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 UBE2V2Q15819 145 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 TMEM200BQ69YZ2 307 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 Q6ZSV7 163 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 PRSS35Q8N3Z0 413 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 ZSCAN4Q8NAM6 433 aaPredicted RBP13.33□□□□□ -0.28
VPS29-207ENST00000549970 C17orf50Q8WW18 174 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 CITED1Q99966 193 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 ORC6Q9Y5N6 252 aa13.33□□□□□ -0.28
VPS29-207ENST00000549970 LOC107986453A0A1B0GWG9 222 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 A0A1W2PPH5 198 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 EI24O14681 340 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 GATBO75879 557 aaKnown RBP13.32□□□□□ -0.28
VPS29-207ENST00000549970 TK1P04183 234 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 ALPLP05186 524 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 PIPP12273 146 aaPredicted RBP13.32□□□□□ -0.28
VPS29-207ENST00000549970 CCL3L1P16619 93 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 ERVK11-1P61568 191 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 IL24Q13007 206 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 ZNF273Q14593 569 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 KPNB1Q14974 876 aaKnown RBP13.32□□□□□ -0.28
VPS29-207ENST00000549970 ZIK1Q3SY52 487 aaPredicted RBP13.32□□□□□ -0.28
VPS29-207ENST00000549970 RDH10Q8IZV5 341 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 ASCC1Q8N9N2 400 aaKnown RBP13.32□□□□□ -0.28
VPS29-207ENST00000549970 BEND2Q8NDZ0 799 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 OR5R1Q8NH85 324 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 CHST5Q9GZS9 411 aa13.32□□□□□ -0.28
VPS29-207ENST00000549970 IGKV1-27A0A075B6S5 117 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 F8VVB4 439 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 F8VWA3 439 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 H3BUX3 64 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 ENTPD6O75354 484 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 UBCP0CG48 685 aaKnown RBP13.31□□□□□ -0.28
VPS29-207ENST00000549970 COX7A1P24310 79 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 PAX6P26367 422 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 KIR3DL2P43630 455 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 FUT6P51993 359 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 ERVFRD-1P60508 538 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 ISL1P61371 349 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 COL10A1Q03692 680 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 MIDNQ504T8 468 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 CCDC54Q8NEL0 328 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 TRUB1Q8WWH5 349 aaKnown RBP13.31□□□□□ -0.28
VPS29-207ENST00000549970 SLAMF9Q96A28 289 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 RNFT2Q96EX2 444 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 BORCS8Q96FH0 119 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 SSX3Q99909 188 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 USE1Q9NZ43 259 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 MTCH1Q9NZJ7 389 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 MEGF8Q7Z7M0 2845 aa13.31□□□□□ -0.28
VPS29-207ENST00000549970 H3BNX3 289 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 CLPXO76031 633 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 SERPINA3P01011 423 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 TGFBR2P37173 567 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 BMXP51813 675 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 PROK1P58294 105 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 CNN3Q15417 329 aaKnown RBP13.3□□□□□ -0.28
VPS29-207ENST00000549970 LY6EQ16553 131 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 ZNF782Q6ZMW2 699 aaPredicted RBP13.3□□□□□ -0.28
VPS29-207ENST00000549970 SLC25A26Q70HW3 274 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 C11orf42Q8N5U0 333 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 HRASLS5Q96KN8 279 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 CEP19Q96LK0 163 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 FAM234AQ9H0X4 552 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 PPA2Q9H2U2 334 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 HEXA-AS1Q9H8Q6 139 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 WNK1Q9H4A3 2382 aa13.3□□□□□ -0.28
VPS29-207ENST00000549970 hCG_1809904A0A1W2PP81 198 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 A0A1W2PPE2 198 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 A0A1W2PR64 198 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 A0A1W2PRV1 198 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 DAPL1A0PJW8 107 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 MEX3AA1L020 520 aaKnown RBP13.29□□□□□ -0.28
VPS29-207ENST00000549970 K7N7A8 449 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 TIMM23O14925 209 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 KCNAB3O43448 404 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 CHRM2P08172 466 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 ALDH3A2P51648 485 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 EDDM3BP56851 147 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 OR12D2P58182 307 aa13.29□□□□□ -0.28
VPS29-207ENST00000549970 ACTC1P68032 377 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms