RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TFAP2CQ92754 450 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 SPSB1Q96BD6 273 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 FGGYQ96C11 551 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 BORCS8Q96FH0 119 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 ZNF488Q96MN9 340 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 WDFY2Q96P53 400 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 SLC6A7Q99884 636 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 DCTN5Q9BTE1 182 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 SIRPDQ9H106 197 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 CNTD2Q9H8S5 307 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 ZNF69Q9UC07 566 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 NKX1-2Q9UD57 310 aaPredicted RBP9.81□□□□□ -0.84
YBX3-217ENST00000546164 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
YBX3-217ENST00000546164 MAB21L2Q9Y586 359 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 KPTNQ9Y664 436 aa9.81□□□□□ -0.84
YBX3-217ENST00000546164 TRAV40A0A0B4J280 105 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 ALX3O95076 343 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 NXPH2O95156 264 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 KNG1P01042 644 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 SELLP14151 372 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 ZNF20P17024 532 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 ATF1P18846 271 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 RBP2P50120 134 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 ETV1P50549 477 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 SRSF2Q01130 221 aaKnown RBP9.8□□□□□ -0.84
YBX3-217ENST00000546164 IKZF1Q13422 519 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 LAIR2Q6ISS4 152 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 RPL22L1Q6P5R6 122 aaKnown RBP9.8□□□□□ -0.84
YBX3-217ENST00000546164 TMPRSS11AQ6ZMR5 421 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 LHFPL2Q6ZUX7 228 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 ANGPTL5Q86XS5 388 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 KIR3DL3Q8N743 410 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 OR13C3Q8NGS6 347 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 OR5AK2Q8NH90 309 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 TRMT10AQ8TBZ6 339 aaKnown RBP9.8□□□□□ -0.84
YBX3-217ENST00000546164 NPRL2Q8WTW4 380 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 TMEM80Q96HE8 168 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 TBX15Q96SF7 602 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 C19orf24Q9BVV8 132 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 COMMD4Q9H0A8 199 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 PLCXD1Q9NUJ7 323 aa9.8□□□□□ -0.84
YBX3-217ENST00000546164 CNOT2Q9NZN8 540 aaKnown RBP9.8□□□□□ -0.84
YBX3-217ENST00000546164 SLC25A10Q9UBX3 287 aaPredicted RBP9.8□□□□□ -0.84
YBX3-217ENST00000546164 TRBV23-1A0A0A0MS06 115 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 EFCAB10A6NFE3 127 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 RFPL4AA6NLU0 287 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 RFPL4AL1F8VTS6 287 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 TOX4O94842 621 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 MYL12AP19105 171 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 AZGP1P25311 298 aaKnown RBP9.79□□□□□ -0.84
YBX3-217ENST00000546164 PRDX2P32119 198 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 GABRA2P47869 451 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 ATP1B3P54709 279 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 MED21Q13503 144 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 CDK5R1Q15078 307 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 PDCD1Q15116 288 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 GPR157Q5UAW9 335 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 METTL11BQ5VVY1 283 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 ZNF561Q8N587 486 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 PARP16Q8N5Y8 322 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 CD177Q8N6Q3 437 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 ZNF485Q8NCK3 441 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 OR52N1Q8NH53 320 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 NRG4Q8WWG1 115 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 C22orf15Q8WYQ4 148 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 GGHQ92820 318 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 CEP19Q96LK0 163 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 OPALINQ96PE5 141 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 PDCD1LG2Q9BQ51 273 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 PCGF1Q9BSM1 259 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 MS4A7Q9GZW8 240 aaPredicted RBP9.79□□□□□ -0.84
YBX3-217ENST00000546164 PRDM13Q9H4Q3 707 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 SEBOXQ9HB31 216 aaPredicted RBP9.79□□□□□ -0.84
YBX3-217ENST00000546164 BABAM2Q9NXR7 383 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 MTCH1Q9NZJ7 389 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 PSORS1C1Q9UIG5 152 aa9.79□□□□□ -0.84
YBX3-217ENST00000546164 TRBV2A0A0J9YWF9 115 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 ERICH4A6NGS2 130 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 TRIM77I1YAP6 450 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 OGG1O15527 345 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 TFF1P04155 84 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 SFTPBP07988 381 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 GTF2A1P52655 376 aaPredicted RBP9.78□□□□□ -0.84
YBX3-217ENST00000546164 ARF6P62330 175 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 ST3GAL4Q11206 333 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 OR2G6Q5TZ20 316 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 XAF1Q6GPH4 301 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 RBMS3Q6XE24 437 aaKnown RBP9.78□□□□□ -0.84
YBX3-217ENST00000546164 C1orf122Q6ZSJ8 110 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 SLC25A26Q70HW3 274 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 SERPINA12Q8IW75 414 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 MKXQ8IYA7 352 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 Q8IYB0 196 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 CMTM4Q8IZR5 234 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 BCL6BQ8N143 479 aaPredicted RBP9.78□□□□□ -0.84
YBX3-217ENST00000546164 SIGLECL1Q8N7X8 197 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 ZDHHC22Q8N966 263 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 ZNRF1Q8ND25 227 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 TMEM185AQ8NFB2 350 aa9.78□□□□□ -0.84
YBX3-217ENST00000546164 OR13C9Q8NGT0 318 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms