RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 SLAMF9Q96A28 289 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 GFI1Q99684 422 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 NRIP2Q9BQI9 281 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 RNF167Q9H6Y7 350 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 CNTD2Q9H8S5 307 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 PLGRKTQ9HBL7 147 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 DCAF16Q9NXF7 216 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 RASL12Q9NYN1 266 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 IL36GQ9NZH8 169 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 MRPS28Q9Y2Q9 187 aaKnown RBP9.05□□□□□ -0.96
PAAF1-216ENST00000546039 WIPI2Q9Y4P8 454 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 PPIAL4AQ9Y536 164 aa9.05□□□□□ -0.96
PAAF1-216ENST00000546039 MYO9AB2RTY4 2548 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 TRAV38-1A0A0B4J264 116 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 OOEPA6NGQ2 149 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 NOTOA8MTQ0 251 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 LGALS8O00214 317 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 SLC22A1O15245 554 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 ANGPTL7O43827 346 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 ZNF780AO75290 641 aaPredicted RBP9.04□□□□□ -0.96
PAAF1-216ENST00000546039 NXPH2O95156 264 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 CDRT1O95170 752 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 IL1AP01583 271 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 IGHV2-70P01814 119 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 MUC1P15941 1255 aaPredicted RBP9.04□□□□□ -0.96
PAAF1-216ENST00000546039 SLC25A16P16260 332 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 EGR1P18146 543 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 HTR2CP28335 458 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 CD80P33681 288 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 MDH2P40926 338 aaKnown RBP9.04□□□□□ -0.96
PAAF1-216ENST00000546039 SERPINB10P48595 397 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 CAPZA1P52907 286 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 OR10A3P58181 314 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 ERVK11-1P61568 191 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 VBP1P61758 197 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 NCS1P62166 190 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 GPR176Q14439 515 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 RSU1Q15404 277 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 MICBQ29980 383 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 TEX36Q5VZQ5 186 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 ACP7Q6ZNF0 438 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 USP43Q70EL4 1123 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 KRTAP1-3Q8IUG1 177 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 BOLLQ8N9W6 283 aaKnown RBP9.04□□□□□ -0.96
PAAF1-216ENST00000546039 OR4D6Q8NGJ1 314 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 TBC1D15Q8TC07 691 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 EMG1Q92979 244 aaKnown RBP9.04□□□□□ -0.96
PAAF1-216ENST00000546039 C12orf43Q96C57 262 aaKnown RBP9.04□□□□□ -0.96
PAAF1-216ENST00000546039 ISOC1Q96CN7 298 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 NKX3-1Q99801 234 aaPredicted RBP9.04□□□□□ -0.96
PAAF1-216ENST00000546039 BPESC1Q9GZL8 116 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 METTL9Q9H1A3 318 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 ELL3Q9HB65 397 aaPredicted RBP9.04□□□□□ -0.96
PAAF1-216ENST00000546039 HES4Q9HCC6 221 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 PCDHB16Q9NRJ7 776 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 MTCH1Q9NZJ7 389 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 DNAJB11Q9UBS4 358 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 GHRLQ9UBU3 117 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 NOTCH2Q04721 2471 aa9.04□□□□□ -0.96
PAAF1-216ENST00000546039 ABCA2Q9BZC7 2435 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.96
PAAF1-216ENST00000546039 IGHV4-30-2A0A087WSY4 118 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 IGKV1-12A0A0C4DH73 117 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 A0A0G2JK05 382 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 SMIM31A0A1B0GVY4 71 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 ISPDA4D126 451 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 IFITM5A6NNB3 132 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 VWC2LB2RUY7 222 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.03□□□□□ -0.96
PAAF1-216ENST00000546039 AIPO00170 330 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 WNT9BO14905 357 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 TMEM127O75204 238 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 BPNT1O95861 308 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 IGKV1D-12P01611 117 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 CSTBP04080 98 aaKnown RBP9.03□□□□□ -0.96
PAAF1-216ENST00000546039 BCL3P20749 454 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 TGFBR1P36897 503 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 NR4A2P43354 598 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 MXD1Q05195 221 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 HNRNPA0Q13151 305 aaKnown RBP9.03□□□□□ -0.96
PAAF1-216ENST00000546039 ZMYND11Q15326 602 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 RAB11BQ15907 218 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 DGUOKQ16854 277 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 ZNF404Q494X3 552 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 TMEM155Q4W5P6 130 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 FAM201AQ5SY85 155 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 ELP2Q6IA86 826 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 FAM166AQ6J272 317 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 SFXN4Q6P4A7 337 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 GLIPR1L1Q6UWM5 242 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 CROCCP3Q8IVE0 287 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 FAM58AQ8N1B3 248 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 SPICQ8N5J4 248 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 ZNF488Q96MN9 340 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 RBM38Q9H0Z9 239 aaKnown RBP9.03□□□□□ -0.96
PAAF1-216ENST00000546039 WDR13Q9H1Z4 485 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 DCSTAMPQ9H295 470 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 RBFOX1Q9NWB1 397 aaKnown RBP9.03□□□□□ -0.96
PAAF1-216ENST00000546039 NDUFA13Q9P0J0 144 aa9.03□□□□□ -0.96
PAAF1-216ENST00000546039 NLKQ9UBE8 527 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms