RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 OR10C1Q96KK4 312 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 PANX2Q96RD6 677 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 SLC39A3Q9BRY0 314 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 DOHHQ9BU89 302 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 PCBD2Q9H0N5 130 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 RNF167Q9H6Y7 350 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 EXO5Q9H790 373 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 RNF122Q9H9V4 155 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 NOX3Q9HBY0 568 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 NGBQ9NPG2 151 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 MED29Q9NX70 200 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 SIGLEC8Q9NYZ4 499 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 TBK1Q9UHD2 729 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 GSTK1Q9Y2Q3 226 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 ARFGEF3Q5TH69 2177 aa2.08□□□□□ -2.08
SNHG1-224ENST00000545688 A0A087X0T9 212 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 A0A1W2PP18 115 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 RBMY1BA6NDE4 496 aaKnown RBP2.07□□□□□ -2.08
SNHG1-224ENST00000545688 GOLGA6L4A6NEF3 574 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 RBMY1EA6NEQ0 496 aaKnown RBP2.07□□□□□ -2.08
SNHG1-224ENST00000545688 E7EQL1 145 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 CDC7O00311 574 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 PEX7O00628 323 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 CST8O60676 142 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 SERPINA6P08185 405 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 CSF3P09919 207 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 H2BFMP0C1H6 154 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 RBMY1DP0C7P1 496 aaKnown RBP2.07□□□□□ -2.08
SNHG1-224ENST00000545688 SLC35G6P0C7Q6 338 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 FAM228BP0C875 321 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 RBMY1A1P0DJD3 496 aaKnown RBP2.07□□□□□ -2.08
SNHG1-224ENST00000545688 PNMTP11086 282 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 CCR8P51685 355 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 EFNA4P52798 201 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 RAB38P57729 211 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 UBA52P62987 128 aaKnown RBP2.07□□□□□ -2.08
SNHG1-224ENST00000545688 SKP1P63208 163 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 KCNJ2P63252 427 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 ACTG1P63261 375 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 HMGCS1Q01581 520 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 ASPHQ12797 758 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 EBPQ15125 230 aaKnown RBP2.07□□□□□ -2.08
SNHG1-224ENST00000545688 GUCA2BQ16661 112 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 HSP90AA4PQ58FG1 418 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 ACSBG2Q5FVE4 666 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 VAX1Q5SQQ9 334 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 OR2A2Q6IF42 318 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 TTC23LQ6PF05 361 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 DGAT2L6Q6ZPD8 337 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 LRRC6Q86X45 466 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 GABRG1Q8N1C3 465 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 RNF10Q8N5U6 811 aaKnown RBP2.07□□□□□ -2.08
SNHG1-224ENST00000545688 OR10A7Q8NGE5 316 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 OR8K1Q8NGG5 319 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 HGDQ93099 445 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 LRRC58Q96CX6 371 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 CMTM7Q96FZ5 175 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 SEC22AQ96IW7 307 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 RILPQ96NA2 401 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 FAM111AQ96PZ2 611 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 OR4K3Q96R72 315 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 TBL1YQ9BQ87 522 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 CCDC77Q9BR77 488 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 ACTR6Q9GZN1 396 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 WDR76Q9H967 626 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 PRTFDC1Q9NRG1 225 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 TREX1Q9NSU2 369 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 CBLN4Q9NTU7 201 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 UVRAGQ9P2Y5 699 aa2.07□□□□□ -2.08
SNHG1-224ENST00000545688 hCG_1818297A0A087WSY0 165 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 H0YC42 278 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 LANCL1O43813 399 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 CDH16O75309 829 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 NIPSNAP2O75323 286 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 CBR3O75828 277 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 TRAPPC6AO75865 159 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 LY6HO94772 140 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 AQP8O94778 261 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 SCELO95171 688 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 MBD3O95983 291 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 CATP04040 527 aaKnown RBP2.06□□□□□ -2.08
SNHG1-224ENST00000545688 MPC1LP0DKB6 136 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 HPGDP15428 266 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 GRIA1P42261 906 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 TTPAP49638 278 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 FBXW4P57775 412 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 RAB8AP61006 207 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 TBPL1P62380 186 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 REEP5Q00765 189 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 BSPH1Q075Z2 132 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 TFDP2Q14188 446 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 POU6F1Q14863 301 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 TMED2Q15363 201 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 ZNHIT3Q15649 155 aaPredicted RBP2.06□□□□□ -2.08
SNHG1-224ENST00000545688 TSC22D1Q15714 1073 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 KLHL38Q2WGJ6 581 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 OR2G6Q5TZ20 316 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 FBXW9Q5XUX1 488 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 TRIM40Q6P9F5 258 aa2.06□□□□□ -2.08
SNHG1-224ENST00000545688 CBLN3Q6UW01 205 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms