RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 DCTN5Q9BTE1 182 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 JAM3Q9BX67 310 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 COMMD4Q9H0A8 199 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 ONECUT1Q9UBC0 465 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 KPTNQ9Y664 436 aa13□□□□□ -0.33
CCDC78-216ENST00000544996 RFPL4AA6NLU0 287 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 RFPL4AL1F8VTS6 287 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 SLC1A7O00341 560 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 CYB5AP00167 134 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 TFF1P04155 84 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 SELLP14151 372 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 MMP9P14780 707 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 PRDX2P32119 198 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 CAPGP40121 348 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 CAPZA1P52907 286 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 ATP1B3P54709 279 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 MTCP1P56278 107 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 CAV3P56539 151 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 MED21Q13503 144 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 C8orf59Q8N0T1 100 aaPredicted RBP12.99□□□□□ -0.33
CCDC78-216ENST00000544996 ZNF561Q8N587 486 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 ZNRF1Q8ND25 227 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 OR5AK2Q8NH90 309 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 FAM216AQ8WUB2 273 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 SPSB1Q96BD6 273 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 SDSLQ96GA7 329 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 SIRPDQ9H106 197 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 NEK6Q9HC98 313 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 CHCHD3Q9NX63 227 aaKnown RBP12.99□□□□□ -0.33
CCDC78-216ENST00000544996 ZNF222Q9UK12 451 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 CAB39Q9Y376 341 aaPredicted RBP12.99□□□□□ -0.33
CCDC78-216ENST00000544996 MAB21L2Q9Y586 359 aa12.99□□□□□ -0.33
CCDC78-216ENST00000544996 TRBV2A0A0J9YWF9 115 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 ZFPL1O95159 310 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 LIMS3P0CW19 117 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 LIMS4P0CW20 117 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 ATF1P18846 271 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 SLC34A1Q06495 639 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 CCDC58Q4VC31 144 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 SLC25A26Q70HW3 274 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.98□□□□□ -0.33
CCDC78-216ENST00000544996 CEP19Q96LK0 163 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 TBX15Q96SF7 602 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 HES4Q9HCC6 221 aa12.98□□□□□ -0.33
CCDC78-216ENST00000544996 DIMT1Q9UNQ2 313 aaKnown RBP12.98□□□□□ -0.33
CCDC78-216ENST00000544996 IGKV1-27A0A075B6S5 117 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 TRBV23-1A0A0A0MS06 115 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 A0A1W2PQ09 198 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 E9PI62 339 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 KNG1P01042 644 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 AZGP1P25311 298 aaKnown RBP12.97□□□□□ -0.33
CCDC78-216ENST00000544996 ETV1P50549 477 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 ERVK11-1P61568 191 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 ACTG1P63261 375 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 BAMBIQ13145 260 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 BLMHQ13867 455 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 TUSC1Q2TAM9 212 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 FIP1L1Q6UN15 594 aaKnown RBP12.97□□□□□ -0.33
CCDC78-216ENST00000544996 BRD3OSQ6XYD6 125 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 LHFPL2Q6ZUX7 228 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 SERPINA12Q8IW75 414 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 MKXQ8IYA7 352 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 Q8IYB0 196 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 BATF2Q8N1L9 274 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 KIR3DL3Q8N743 410 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 ZDHHC22Q8N966 263 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 OR51A4Q8NGJ6 313 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 OR5D14Q8NGL3 314 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 OR10AC1Q8NH08 325 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 C8orf46Q8TAG6 207 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 TSEN15Q8WW01 171 aaKnown RBP12.97□□□□□ -0.33
CCDC78-216ENST00000544996 GATAD2BQ8WXI9 593 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 TMEM80Q96HE8 168 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 OPALINQ96PE5 141 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 PDCD1LG2Q9BQ51 273 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 ZMAT3Q9HA38 289 aaKnown RBP12.97□□□□□ -0.33
CCDC78-216ENST00000544996 MTCH1Q9NZJ7 389 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 OR14J1Q9UGF5 321 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 DHDHQ9UQ10 334 aa12.97□□□□□ -0.33
CCDC78-216ENST00000544996 EXOSC1Q9Y3B2 195 aaKnown RBP12.97□□□□□ -0.33
CCDC78-216ENST00000544996 IGKV1-9A0A0C4DH69 117 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 CENPVL3A0A0U1RRI6 287 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 ERICH4A6NGS2 130 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 GNAO1P09471 354 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 POU3F4P49335 361 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 UBA52P62987 128 aaKnown RBP12.96□□□□□ -0.33
CCDC78-216ENST00000544996 RPL22L1Q6P5R6 122 aaKnown RBP12.96□□□□□ -0.33
CCDC78-216ENST00000544996 VMO1Q7Z5L0 202 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 CD177Q8N6Q3 437 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 OR13C9Q8NGT0 318 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 LHX4Q969G2 390 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 ZNF48Q96MX3 618 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-216ENST00000544996 ZCCHC4Q9H5U6 513 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 ESM1Q9NQ30 184 aa12.96□□□□□ -0.33
CCDC78-216ENST00000544996 IGHV1-69DA0A0B4J2H0 117 aa12.95□□□□□ -0.34
CCDC78-216ENST00000544996 A0A1W2PPH5 198 aa12.95□□□□□ -0.34
CCDC78-216ENST00000544996 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
CCDC78-216ENST00000544996 INMTO95050 263 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms