RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SRMP19623 302 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 LMO4P61968 165 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 KCNJ8Q15842 424 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 MICBQ29980 383 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 FAM90A1Q86YD7 464 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 MKXQ8IYA7 352 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 OR51F2Q8NH61 342 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 C18orf12Q96KH6 178 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 CEP19Q96LK0 163 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 MRPS26Q9BYN8 205 aaKnown RBP11.4□□□□□ -0.58
SP140-213ENST00000543928 EXOSC4Q9NPD3 245 aaKnown RBP11.4□□□□□ -0.58
SP140-213ENST00000543928 SNTG1Q9NSN8 517 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 PCDHB10Q9UN67 800 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 STUB1Q9UNE7 303 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 HIVEP1P15822 2718 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 F8P00451 2351 aa11.4□□□□□ -0.58
SP140-213ENST00000543928 IGKV1-12A0A0C4DH73 117 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 MEGF11A6BM72 1044 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 F8VVB4 439 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 F8VWA3 439 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 TRAPPC2LH3BP13 241 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 IGKV1D-12P01611 117 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 IGHV2-5P01817 119 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 GYPAP02724 150 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 INHBBP09529 407 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 TMEM225BP0DP42 221 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 ADRA2CP18825 462 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 BCL3P20749 454 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 GALP22466 123 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 CALRP27797 417 aaKnown RBP11.39□□□□□ -0.59
SP140-213ENST00000543928 OR3A4PP47883 348 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 ERVK11-1P61568 191 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 TMEM249Q2WGJ8 235 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 SMIM21Q3B7S5 101 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 ACP7Q6ZNF0 438 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 DCDC5Q6ZRR9 648 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 LRRTM1Q86UE6 522 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 JAGN1Q8N5M9 183 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 NKAIN3Q8N8D7 197 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 ZSCAN4Q8NAM6 433 aaPredicted RBP11.39□□□□□ -0.59
SP140-213ENST00000543928 OR5T2Q8NGG2 359 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 TNFAIP8L1Q8WVP5 186 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 C12orf43Q96C57 262 aaKnown RBP11.39□□□□□ -0.59
SP140-213ENST00000543928 RAB39BQ96DA2 213 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 FAM192AQ9GZU8 254 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 SLITRK2Q9H156 845 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 OR51E2Q9H255 320 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 ZNF665Q9H7R5 613 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 PATZ1Q9HBE1 687 aaKnown RBP11.39□□□□□ -0.59
SP140-213ENST00000543928 HES4Q9HCC6 221 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 SMURF1Q9HCE7 757 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 RASL12Q9NYN1 266 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 NLKQ9UBE8 527 aa11.39□□□□□ -0.59
SP140-213ENST00000543928 TNFRSF13BO14836 293 aaPredicted RBP11.38□□□□□ -0.59
SP140-213ENST00000543928 NDUFA2O43678 99 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 HEXAP06865 529 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 RPS2P15880 293 aaKnown RBP11.38□□□□□ -0.59
SP140-213ENST00000543928 GADD45AP24522 165 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 PTGFRP43088 359 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 NPBWR2P48146 333 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 STUMQ69YW2 141 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 C22orf42Q6IC83 251 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 LYPD2Q6UXB3 125 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 C1QL2Q7Z5L3 287 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 CDH26Q8IXH8 852 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 SAXO1Q8IYX7 474 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 PNLDC1Q8NA58 520 aaKnown RBP11.38□□□□□ -0.59
SP140-213ENST00000543928 RBFOX1Q9NWB1 397 aaKnown RBP11.38□□□□□ -0.59
SP140-213ENST00000543928 TXNL4BQ9NX01 149 aaKnown RBP11.38□□□□□ -0.59
SP140-213ENST00000543928 MIOXQ9UGB7 285 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 SSR3Q9UNL2 185 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 ABCA1O95477 2261 aa11.38□□□□□ -0.59
SP140-213ENST00000543928 YLPM1P49750 1951 aaKnown RBP11.37□□□□□ -0.59
SP140-213ENST00000543928 ABCA2Q9BZC7 2435 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 OR2AT4A6NND4 320 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 FAM157AC9JC47 383 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 F5H0A9 414 aaPredicted RBP11.37□□□□□ -0.59
SP140-213ENST00000543928 ADAM20O43506 726 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 KDM4BO94953 1096 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 CDRT1O95170 752 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 TFF1P04155 84 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 SFTPBP07988 381 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 WNT2P09544 360 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 CALCBP10092 127 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 FOSL1P15407 271 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 FGF9P31371 208 aaPredicted RBP11.37□□□□□ -0.59
SP140-213ENST00000543928 GABRA2P47869 451 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 SEC61A1P61619 476 aaKnown RBP11.37□□□□□ -0.59
SP140-213ENST00000543928 NLRC3Q7RTR2 1065 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 LYPD6Q86Y78 171 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 Q8IYB0 196 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 PXT1Q8NFP0 134 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 ANGPTL6Q8NI99 470 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 EMG1Q92979 244 aaKnown RBP11.37□□□□□ -0.59
SP140-213ENST00000543928 YIPF6Q96EC8 236 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 NEIL1Q96FI4 390 aaPredicted RBP11.37□□□□□ -0.59
SP140-213ENST00000543928 CCL13Q99616 98 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 CHCHD6Q9BRQ6 235 aa11.37□□□□□ -0.59
SP140-213ENST00000543928 CNTD2Q9H8S5 307 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms